4930527A07Rik Gene Detail

Summary

• Symbol
  4930527A07Rik
• Name
  RIKEN cDNA 4930527A07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922444
  NCBI Gene: 105244259
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:105306788-105379988 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 55.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2100 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922444	lncRNA gene	Chr2:105306785-105379993 (+)
129S1/SvImJ	ENSMUSG00200008124	lncRNA gene	Chr2:102135876-102136732 (+)
A/J	ENSMUSG00195032150	lncRNA gene	Chr2:102296350-102297206 (+)
AKR/J	ENSMUSG00220005080	lncRNA gene	Chr2:102041793-102042649 (+)
BALB/cJ	ENSMUSG00180033738	lncRNA gene	Chr2:102091828-102092684 (+)
C3H/HeJ	ENSMUSG00175033395	lncRNA gene	Chr2:102378875-102379734 (+)
C57BL/6NJ	ENSMUSG00215026183	lncRNA gene	Chr2:102193919-102194775 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005442	lincRNA gene	Chr2:98952769-98953638 (+)
CAST/EiJ	ENSTCUG00005005951	lncRNA gene	Chr2:101459434-101460294 (+)
CBA/J	ENSMUSG00210040229	lncRNA gene	Chr2:102369462-102370318 (+)
DBA/2J	ENSMUSG00185040350	lncRNA gene	Chr2:102088415-102089271 (+)
FVB/NJ	ENSMUSG00205018928	lncRNA gene	Chr2:101428706-101429558 (+)
JF1/MsJ	ENSUMUG00000004015	lncRNA gene	Chr2:101788386-101789245 (+)
LP/J	ENSMUSG00230006539	lncRNA gene	Chr2:103837705-103838561 (+)
NOD/ShiLtJ	ENSMUSG00190016493	lncRNA gene	Chr2:102217170-102218026 (+)
NZO/HlLtJ	ENSMUSG00225008777	lncRNA gene	Chr2:111742377-111743233 (+)
PWK/PhJ	ENSLUMG00010024704	lncRNA gene	Chr2:101805154-101806013 (+)
SPRET/EiJ	ENSMSPG00010039157	lncRNA gene	Chr2:103842403-103843242 (+)
WSB/EiJ	ENSIUOG00005032282	lncRNA gene	Chr2:101891962-101892818 (+)

Homology

• Gene Tree
  4930527A07Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving 4930527A07Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000086764 (Evidence)
• NCBI Gene
  105244259

Representative Sequences			Length	Strain/Species
genomic	105244259	NCBI Gene Model | MGI Sequence Detail	73201	C57BL/6J
transcript	NR_166134	RefSeq | MGI Sequence Detail	802	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 12

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:151902 Favor J, et al., Analysis of Pax6 Contiguous Gene Deletions in the Mouse, Mus musculus, Identifies Regions Distinct from Pax6 Responsible for Extreme Small-Eye and Belly-Spotting Phenotypes. Genetics. 2009 Aug;182(4):1077-88