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Thap6 Pseudogene Detail
Summary
  • Symbol
    Thap6
  • Name
    THAP domain containing 6
  • Synonyms
    4930534K21Rik
Location &
Maps
more
  • Sequence Map
    Chr5:92111565-92117654 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 45.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    232 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922436
 pseudogene Chr5:92110741-92119996 (+)
129S1/SvImJ ENSMUSG00200009279
 pseudogene Chr5:87853501-87863209 (+)
A/J ENSMUSG00195026339
 pseudogene Chr5:87011367-87021045 (+)
AKR/J ENSMUSG00220012231
 pseudogene Chr5:87158359-87168061 (+)
BALB/cJ ENSMUSG00180025792
 pseudogene Chr5:86852748-86862446 (+)
C3H/HeJ ENSMUSG00175045532
 pseudogene Chr5:88953551-88963254 (+)
C57BL/6NJ ENSMUSG00215033341
 pseudogene Chr5:87710489-87720166 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037015
 pseudogene Chr5:85071002-85080826 (+)
CAST/EiJ ENSTCUG00005037706
 pseudogene Chr5:86577430-86587427 (+)
CBA/J ENSMUSG00210006836
 pseudogene Chr5:87732296-87741998 (+)
DBA/2J ENSMUSG00185041388
 pseudogene Chr5:89669023-89678725 (+)
FVB/NJ ENSMUSG00205030738
 pseudogene Chr5:86557720-86567422 (+)
JF1/MsJ ENSUMUG00000045834
 pseudogene Chr5:93915918-93926124 (+)
LP/J ENSMUSG00230028000
 pseudogene Chr5:94364697-94374404 (+)
NOD/ShiLtJ ENSMUSG00190040153
 pseudogene Chr5:86640008-86649685 (+)
NZO/HlLtJ ENSMUSG00225009371
 pseudogene Chr5:99511249-99520926 (+)
PWK/PhJ ENSLUMG00010032367
 pseudogene Chr5:86603453-86613706 (+)
SPRET/EiJ ENSMSPG00010037281
 pseudogene Chr5:88977852-88987885 (+)
WSB/EiJ ENSIUOG00005030111
 pseudogene Chr5:89631029-89640731 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    4
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Thap6
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    626
  • Tissues
    29
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102644 Ensembl Gene Model | MGI Sequence Detail 6090 C57BL/6J ±  kb
transcript ENSMUST00000191860 Ensembl | MGI Sequence Detail 667 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140886
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Phenotypes 9
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory