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4930509E16Rik Gene Detail
Summary
  • Symbol
    4930509E16Rik
  • Name
    RIKEN cDNA 4930509E16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922365
    NCBI Gene: 75115
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:72425532-72439140 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 40.08 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922365
 lncRNA gene Chr9:72425532-72439140 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007454
 lincRNA gene Chr9:72684991-72698996 (-)
A/J MGP_AJ_G0007449
 lincRNA gene Chr9:70153334-70168115 (-)
AKR/J MGP_AKRJ_G0007422
 lincRNA gene Chr9:71827780-71843418 (-)
BALB/cJ MGP_BALBcJ_G0007427
 lincRNA gene Chr9:69860358-69874901 (-)
C3H/HeJ MGP_C3HHeJ_G0007371
 lincRNA gene Chr9:72330455-72345977 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007599
 lincRNA gene Chr9:74583227-74597213 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006787
 lincRNA gene Chr9:69647743-69661159 (-)
CAST/EiJ MGP_CASTEiJ_G0007275
 lincRNA gene Chr9:72639664-72657101 (-)
CBA/J MGP_CBAJ_G0007353
 lincRNA gene Chr9:77190888-77207024 (-)
DBA/2J MGP_DBA2J_G0007377
 lincRNA gene Chr9:69871467-69885822 (-)
FVB/NJ MGP_FVBNJ_G0007395
 lincRNA gene Chr9:69187042-69200936 (-)
LP/J MGP_LPJ_G0007459
 lincRNA gene Chr9:72888010-72901129 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007375
 lincRNA gene Chr9:78259067-78292300 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007602
 lincRNA gene Chr9:71968934-71984101 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0007120
 lincRNA gene Chr9:72277371-72290438 (-)
WSB/EiJ MGP_WSBEiJ_G0007335
 lincRNA gene Chr9:71905476-71918733 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Genomic Mutations
    1 involving 4930509E16Rik
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 75115 NCBI Gene Model | MGI Sequence Detail 13609 C57BL/6J ±  kb
transcript NR_045735 RefSeq | MGI Sequence Detail 1191 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory