4930477N07Rik Gene Detail

Summary

• Symbol
  4930477N07Rik
• Name
  RIKEN cDNA 4930477N07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922155
  NCBI Gene: 74905
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:119156139-119167767 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  422 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922155	lncRNA gene	Chr10:119098288-119218813 (+)
129S1/SvImJ	ENSMUSG00200026757	lncRNA gene	Chr10:115506797-115518423 (+)
A/J	ENSMUSG00195022077	lncRNA gene	Chr10:115906701-115918357 (+)
AKR/J	ENSMUSG00220014853	lncRNA gene	Chr10:115535861-115547509 (+)
BALB/cJ	ENSMUSG00180016941	lncRNA gene	Chr10:115919335-115930993 (+)
C3H/HeJ	ENSMUSG00175024998	lncRNA gene	Chr10:115924249-115935875 (+)
C57BL/6NJ	ENSMUSG00215021828	lncRNA gene	Chr10:115565635-115577263 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032331	lncRNA gene	Chr10:114892453-114904085 (+)
CBA/J	ENSMUSG00210021613	lncRNA gene	Chr10:115761129-115772755 (+)
DBA/2J	ENSMUSG00185009251	lncRNA gene	Chr10:115870751-115882407 (+)
FVB/NJ	ENSMUSG00205031046	lncRNA gene	Chr10:115169816-115181469 (+)
JF1/MsJ	ENSUMUG00000020126	lncRNA gene	Chr10:117140671-117152319 (+)
LP/J	ENSMUSG00230025538	lncRNA gene	Chr10:117833282-117844929 (+)
NOD/ShiLtJ	ENSMUSG00190018583	lncRNA gene	Chr10:115972713-115984360 (+)
NZO/HlLtJ	ENSMUSG00225019094	lncRNA gene	Chr10:122079386-122091011 (+)
PWK/PhJ	ENSLUMG00010014285	lncRNA gene	Chr10:115541397-115553031 (+)
SPRET/EiJ	ENSMSPG00010016289	lncRNA gene	Chr10:117472220-117483859 (+)
WSB/EiJ	ENSIUOG00005013873	lncRNA gene	Chr10:115590622-115602245 (+)

Homology

• Gene Tree
  4930477N07Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 4930477N07Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  2

• Ensembl
  ENSMUSG00000112155 (Evidence)
• NCBI Gene
  74905

Representative Sequences			Length	Strain/Species
genomic	74905	NCBI Gene Model | MGI Sequence Detail	11629	C57BL/6J
transcript	NR_126085	RefSeq | MGI Sequence Detail	686	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573