4930519E07Rik Gene Detail

Summary

• Symbol
  4930519E07Rik
• Name
  RIKEN cDNA 4930519E07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1921963
  NCBI Gene: 74713
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:41438579-41440243 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921963	lncRNA gene	Chr5:41438579-41440243 (+)
129S1/SvImJ	ENSMUSG00200032723	unclassified gene	Chr5:36935644-36937310 (+)
A/J	ENSMUSG00195029694	unclassified gene	Chr5:36339949-36341613 (+)
AKR/J	ENSMUSG00220002519	unclassified gene	Chr5:36383512-36385176 (+)
BALB/cJ	ENSMUSG00180024803	unclassified gene	Chr5:36153983-36155650 (+)
C3H/HeJ	ENSMUSG00175020905	unclassified gene	Chr5:38132993-38134657 (+)
C57BL/6NJ	ENSMUSG00215006729	unclassified gene	Chr5:36891143-36892807 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001246	unclassified gene	Chr5:35954341-35955995 (+)
CAST/EiJ	ENSTCUG00005025499	unclassified gene	Chr5:36296627-36298287 (+)
CBA/J	ENSMUSG00210005116	unclassified gene	Chr5:37100868-37102532 (+)
DBA/2J	ENSMUSG00185017812	unclassified gene	Chr5:38991645-38993314 (+)
FVB/NJ	ENSMUSG00205020123	unclassified gene	Chr5:35930503-35932172 (+)
JF1/MsJ	ENSUMUG00000002440	unclassified gene	Chr5:43558724-43560382 (+)
LP/J	ENSMUSG00230003039	unclassified gene	Chr5:43633622-43635288 (+)
NOD/ShiLtJ	ENSMUSG00190003394	unclassified gene	Chr5:36175573-36177237 (+)
NZO/HlLtJ	ENSMUSG00225017874	unclassified gene	Chr5:48824176-48825844 (+)
PWK/PhJ	ENSLUMG00010024026	unclassified gene	Chr5:36208817-36210473 (+)
SPRET/EiJ	ENSMSPG00010037897	unclassified gene	Chr5:37517425-37519093 (+)
WSB/EiJ	ENSIUOG00005018976	unclassified gene	Chr5:39087806-39089473 (+)

Homology

• Gene Tree
  4930519E07Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  14 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (ENU)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving 4930519E07Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106865 (Evidence)
• NCBI Gene
  74713

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106865	Ensembl Gene Model | MGI Sequence Detail	1665	C57BL/6J
transcript	AK015840	GenBank | ENA | DDBJ | MGI Sequence Detail	1666	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 21

  Diseases 1

  Phenotypes 14
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707