4930429F24Rik Gene Detail

Summary

• Symbol
  4930429F24Rik
• Name
  RIKEN cDNA 4930429F24 gene
• Synonyms
  Myolinc

• Feature Type
  lncRNA gene
• IDs
  MGI:1921883
  NCBI Gene: 74633
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr9:79700923-79710517 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  60 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921883	lncRNA gene	Chr9:79700881-79710517 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015747	unclassified non-coding RNA gene	Chr9:80334263-80343882 (+)
A/J	MGP_AJ_G0015724	unclassified non-coding RNA gene	Chr9:77590326-77599918 (+)
AKR/J	MGP_AKRJ_G0015688	unclassified non-coding RNA gene	Chr9:79392840-79402434 (+)
BALB/cJ	MGP_BALBcJ_G0015685	unclassified non-coding RNA gene	Chr9:77210962-77220556 (+)
C3H/HeJ	MGP_C3HHeJ_G0015507	unclassified non-coding RNA gene	Chr9:79918291-79927885 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016141	unclassified non-coding RNA gene	Chr9:82521509-82531103 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013867	unclassified non-coding RNA gene	Chr9:76724796-76734468 (+)
CAST/EiJ	MGP_CASTEiJ_G0015062	unclassified non-coding RNA gene	Chr9:80254644-80268935 (+)
CBA/J	MGP_CBAJ_G0015487	unclassified non-coding RNA gene	Chr9:85459186-85468780 (+)
DBA/2J	MGP_DBA2J_G0015585	unclassified non-coding RNA gene	Chr9:77197902-77207499 (+)
FVB/NJ	MGP_FVBNJ_G0015590	unclassified non-coding RNA gene	Chr9:76413922-76423516 (+)
LP/J	MGP_LPJ_G0015665	unclassified non-coding RNA gene	Chr9:80594994-80604613 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015613	unclassified non-coding RNA gene	Chr9:86699224-86708818 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016183	unclassified non-coding RNA gene	Chr9:79614824-79624418 (+)
PWK/PhJ	MGP_PWKPhJ_G0014843	unclassified non-coding RNA gene	Chr9:77398621-77408811 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014631	unclassified non-coding RNA gene	Chr9:79750475-79761145 (+)
WSB/EiJ	MGP_WSBEiJ_G0015166	unclassified non-coding RNA gene	Chr9:79551563-79561157 (+)

Homology

• Gene Tree
  4930429F24Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 4930429F24Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000086918 (Evidence)
• NCBI Gene
  74633

Representative Sequences			Length	Strain/Species
genomic	74633	NCBI Gene Model | MGI Sequence Detail	9595	C57BL/6J
transcript	NR_040734	RefSeq | MGI Sequence Detail	1520	C57BL/6

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

References

• Summaries
  All 17

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:318521 Militello G, et al., A novel long non-coding RNA Myolinc regulates myogenesis through TDP-43 and Filip1. J Mol Cell Biol. 2018 Apr 1;10(2):102-117

TSS for 4930429F24Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr86306	Chr9:79700235-79700277 (+)	-667 bp
Tssr86307	Chr9:79700909-79700952 (+)	8 bp