4930432L08Rik Gene Detail

Summary

• Symbol
  4930432L08Rik
• Name
  RIKEN cDNA 4930432L08 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1921871
  NCBI Gene: 74621
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:76479085-76489732 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 40.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  377 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921871	lncRNA gene	Chr5:76479085-76489732 (+)
129S1/SvImJ	ENSMUSG00200001202	lncRNA gene	Chr5:72169261-72179908 (+)
A/J	ENSMUSG00195010728	lncRNA gene	Chr5:71466065-71476715 (+)
AKR/J	ENSMUSG00220014903	lncRNA gene	Chr5:71579235-71589883 (+)
BALB/cJ	ENSMUSG00180023981	lncRNA gene	Chr5:71240993-71251640 (+)
C3H/HeJ	ENSMUSG00175004244	lncRNA gene	Chr5:73284795-73295443 (+)
C57BL/6NJ	ENSMUSG00215000549	lncRNA gene	Chr5:72055575-72066222 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013733	unclassified non-coding RNA gene	Chr5:69235984-69246649 (+)
CAST/EiJ	ENSTCUG00005013968	lncRNA gene	Chr5:71026892-71037599 (+)
CBA/J	ENSMUSG00210000728	lncRNA gene	Chr5:72222799-72233447 (+)
DBA/2J	ENSMUSG00185016607	lncRNA gene	Chr5:74052744-74063394 (+)
FVB/NJ	ENSMUSG00205036130	lncRNA gene	Chr5:70989084-70999732 (+)
JF1/MsJ	ENSUMUG00000006436	lncRNA gene	Chr5:78522461-78533092 (+)
LP/J	ENSMUSG00230023129	lncRNA gene	Chr5:78743255-78753902 (+)
NOD/ShiLtJ	ENSMUSG00190007772	lncRNA gene	Chr5:71173191-71183842 (+)
NZO/HlLtJ	ENSMUSG00225035074	lncRNA gene	Chr5:83790227-83800874 (+)
PWK/PhJ	ENSLUMG00010007548	lncRNA gene	Chr5:71115791-71126419 (+)
SPRET/EiJ	ENSMSPG00010010081	lncRNA gene	Chr5:73105499-73116257 (+)
WSB/EiJ	ENSIUOG00005018805	lncRNA gene	Chr5:74002698-74013156 (+)

Homology

• Gene Tree
  4930432L08Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  2
• Endonuclease-mediated
  1
• Gene trapped
  1
• Spontaneous
  2
• Genomic Mutations
  5 involving 4930432L08Rik
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000087037 (Evidence)
• NCBI Gene
  74621

Representative Sequences			Length	Strain/Species
genomic	74621	NCBI Gene Model | MGI Sequence Detail	10648	C57BL/6J
transcript	NR_152115	RefSeq | MGI Sequence Detail	1608	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 15

  Phenotypes 7
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:233978 Mizuno S, et al., Peri-implantation lethality in mice carrying megabase-scale deletion on 5qc3.3 is caused by Exoc1 null mutation. Sci Rep. 2015;5:13632

TSS for 4930432L08Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46723	Chr5:76479031-76479044 (+)	-47 bp