Gvin1 Gene Detail

Summary

• Symbol
  Gvin1
• Name
  GTPase, very large interferon inducible 1
• Synonyms
  9130002C22Rik, 9830104F22Rik, Iigs1, VLIG, VLIG-1

• Feature Type
  protein coding gene
• IDs
  MGI:1921808
  NCBI Gene: 74558
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:105755763-105814533 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 55.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921808	protein coding gene	Chr7:105755742-105814547 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0032748	protein coding gene	Chr7:107090163-107096719 (-)
AKR/J	MGP_AKRJ_G0032681	protein coding gene	Chr7:109794317-109843522 (-)
BALB/cJ	MGP_BALBcJ_G0032754	protein coding gene	Chr7:106552421-106830518 (-)
C3H/HeJ	MGP_C3HHeJ_G0032463	protein coding gene	Chr7:109909079-109917838 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0033259	protein coding gene	Chr7:114428625-114437181 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0031792	protein coding gene	Chr7:101525323-101537657 (-)
CBA/J	MGP_CBAJ_G0032437	protein coding gene	Chr7:118225798-118234168 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  GVINP1, GTPase, very large interferon inducible pseudogene 1

• Vertebrate Orthologs
  5

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  GVINP1, GTPase, very large interferon inducible pseudogene 1
  
• Synonyms
  GVIN1, GVIN1P, VLIG1, VLIG-1
• Links
  HGNC:25813

  NCBI Gene ID: 387751

  UniProt: Q7Z2Y8

  
  
• Chr Location
  11p15.4; chr11:6713139-6721879 (-)  GRCh38.p7

---

• Alliance of Genome Resources
  Gvin1 stringent orthology
  1 human;1 mouse;1 rat;3 zebrafish
  
• HCOP
  vertebrate homology predictions: GVINP1
• Gene Tree
  Gvin1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gvin1
• Incidental Mutations
  APF , CvDC
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  8

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Interactions

• Gvin1 interacts with 274 markers (Mir1b, Mir7-1, Mir7-2, ...) View All

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  6
• UniProt
  1
• CCDS
  CCDS21663.1

• Ensembl
  ENSMUSG00000045868 (Evidence)
• NCBI Gene
  74558

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000045868	Ensembl Gene Model | MGI Sequence Detail	58771	C57BL/6J
transcript	ENSMUST00000006667	Ensembl | MGI Sequence Detail	8795	Not Applicable
polypeptide	ENSMUSP00000006667	Ensembl | MGI Sequence Detail	2427	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 8

  cDNA 8

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:2441761

References

• Summaries
  All 28

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582