A730049H05Rik Gene Detail

Summary

• Symbol
  A730049H05Rik
• Name
  RIKEN cDNA A730049H05 gene
• Synonyms
  8430417A20Rik

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:1921766
  NCBI Gene: 74516
• Alliance
  genome feature page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr6:92793424-92820449 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 41.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  703 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921766	protein coding gene	Chr6:92793401-92824155 (+)
129S1/SvImJ	ENSMUSG00200042414	protein coding gene	Chr6:89748404-89775382 (+)
A/J	ENSMUSG00195037636	protein coding gene	Chr6:89474265-89501239 (+)
AKR/J	ENSMUSG00220031279	protein coding gene	Chr6:88378615-88405611 (+)
BALB/cJ	ENSMUSG00180016839	protein coding gene	Chr6:89839418-89866397 (+)
C3H/HeJ	ENSMUSG00175024705	protein coding gene	Chr6:87559198-87589780 (-)
C57BL/6NJ	ENSMUSG00215013871	protein coding gene	Chr6:89847423-89874412 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0028667	protein coding gene	Chr6:88867475-88897310 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210039972	protein coding gene	Chr6:89634313-89664897 (+)
DBA/2J	ENSMUSG00185037757	protein coding gene	Chr6:90166279-90193257 (+)
FVB/NJ	ENSMUSG00205025715	protein coding gene	Chr6:88829122-88856087 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230010904	protein coding gene	Chr6:91306107-91333083 (+)
NOD/ShiLtJ	ENSMUSG00190033768	protein coding gene	Chr6:89241632-89268596 (+)
NZO/HlLtJ	ENSMUSG00225039105	protein coding gene	Chr6:93308972-93335948 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  A730049H05Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  5
• Gene trapped
  3
• Spontaneous
  1
• Targeted
  1
• Genomic Mutations
  1 involving A730049H05Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  12 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000048636 (Evidence)
• NCBI Gene
  74516

Representative Sequences			Length	Strain/Species
genomic	74516	NCBI Gene Model | MGI Sequence Detail	27026	C57BL/6J
transcript	NR_169152	RefSeq | MGI Sequence Detail	2277	C57BL/6
polypeptide	Q8C940	UniProt | EBI | MGI Sequence Detail	139	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 23

  Phenotypes 9
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376

TSS for A730049H05Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr57792	Chr6:92793414-92793436 (+)	1 bp
Tssr57793	Chr6:92793441-92793464 (+)	29 bp
Tssr57794	Chr6:92793470-92793479 (+)	51 bp
Tssr57795	Chr6:92804615-92804644 (+)	11,206 bp
Tssr57796	Chr6:92804653-92804666 (+)	11,236 bp
Tssr57797	Chr6:92804706-92804728 (+)	11,293 bp
Tssr57798	Chr6:92804760-92804771 (+)	11,342 bp