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4933408J17Rik Gene Detail
Summary
  • Symbol
    4933408J17Rik
  • Name
    RIKEN cDNA 4933408J17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921704
    NCBI Gene: 74454
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:93425275-93441107 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 48.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    284 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921704
 lncRNA gene Chr10:93425275-93441107 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017655
 protein coding gene Chr10:95013823-95028316 (+)
A/J MGP_AJ_G0017634
 protein coding gene Chr10:91708508-91721973 (+)
AKR/J MGP_AKRJ_G0017592
 protein coding gene Chr10:94329345-94342815 (+)
BALB/cJ MGP_BALBcJ_G0017597
 protein coding gene Chr10:91975430-91989396 (+)
C3H/HeJ MGP_C3HHeJ_G0017420
 protein coding gene Chr10:94333821-94352214 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018054
 protein coding gene Chr10:98143710-98159532 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0016985
 protein coding gene Chr10:94303318-94321486 (+)
CBA/J MGP_CBAJ_G0017389
 protein coding gene Chr10:102212559-102228494 (+)
DBA/2J MGP_DBA2J_G0017495
 protein coding gene Chr10:90806103-90819844 (+)
FVB/NJ MGP_FVBNJ_G0017487
 protein coding gene Chr10:90013888-90029366 (+)
LP/J MGP_LPJ_G0017569
 protein coding gene Chr10:95634551-95651971 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017518
 protein coding gene Chr10:103517749-103531290 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018091
 protein coding gene Chr10:94222693-94236792 (+)
PWK/PhJ MGP_PWKPhJ_G0016766
 protein coding gene Chr10:90885120-90901213 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016554
 protein coding gene Chr10:93021685-93037154 (+)
WSB/EiJ MGP_WSBEiJ_G0017044
 protein coding gene Chr10:94195826-94211096 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 74454 NCBI Gene Model | MGI Sequence Detail 15833 C57BL/6J ±  kb
transcript NR_045810 RefSeq | MGI Sequence Detail 1859 C57BL/6  
polypeptide Q9D475 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory