Gsdmcl1 Pseudogene Detail

Summary

• Symbol
  Gsdmcl1
• Name
  gasdermin C-like 1
• Synonyms
  1700022L20Rik, Gsdmdc2

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:1921486
  NCBI Gene: 74236
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:63719158-63722791 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 27.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921486	pseudogene	Chr15:63719151-63727354 (+)
129S1/SvImJ	ENSMUSG00200031191	pseudogene	Chr15:60751998-60759846 (+)
A/J	ENSMUSG00195006617	pseudogene	Chr15:60775530-60783375 (+)
A/J	ENSMUSG00195005914	protein coding gene	Chr15:60775538-60781434 (+)
AKR/J	ENSMUSG00220021981	pseudogene	Chr15:60691970-60699815 (+)
BALB/cJ	ENSMUSG00180009443	pseudogene	Chr15:60684679-60692526 (+)
C3H/HeJ	ENSMUSG00175005127	pseudogene	Chr15:60976108-60983953 (+)
C57BL/6NJ	ENSMUSG00215012259	pseudogene	Chr15:60702877-60710723 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036951	pseudogene	Chr15:57764681-57832845 (+)
CAST/EiJ	ENSTCUG00005007182	pseudogene	Chr15:60527348-60535390 (+)
CBA/J	ENSMUSG00210007019	protein coding gene	Chr15:60807781-60812843 (+)
CBA/J	ENSMUSG00210007269	pseudogene	Chr15:60807761-60815606 (+)
DBA/2J	ENSMUSG00185026950	pseudogene	Chr15:60743072-60750919 (+)
DBA/2J	ENSMUSG00185025801	protein coding gene	Chr15:60743088-60749556 (+)
FVB/NJ	ENSMUSG00205007461	pseudogene	Chr15:60501907-60509754 (+)
FVB/NJ	ENSMUSG00205006343	protein coding gene	Chr15:60501919-60583816 (+)
JF1/MsJ	ENSUMUG00000032938	pseudogene	Chr15:60515028-60523073 (+)
LP/J	ENSMUSG00230026252	pseudogene	Chr15:64078710-64086554 (+)
LP/J	ENSMUSG00230024305	protein coding gene	Chr15:64078726-64083886 (+)
NOD/ShiLtJ	ENSMUSG00190017866	pseudogene	Chr15:60791422-60799270 (+)
NZO/HlLtJ	ENSMUSG00225027441	pseudogene	Chr15:64361268-64369114 (+)
PWK/PhJ	ENSLUMG00010031107	pseudogene	Chr15:60825645-60833669 (+)
SPRET/EiJ	ENSMSPG00010004422	pseudogene	Chr15:62133096-62144381 (+)
WSB/EiJ	ENSIUOG00005006742	pseudogene	Chr15:60801664-60809511 (+)

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  25 phenotype references
  

• All Mutations and Alleles
  10
• Chemically induced (other)
  3
• Radiation induced
  2
• Transposon induced
  5
• Genomic Mutations
  10 involving Gsdmcl1
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  6 strains or lines available

Expression

• cDNA Data
  2

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  54
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS49616.1

• Ensembl
  ENSMUSG00000062543 (Evidence), ENSMUSG00000121310 (Evidence)
• NCBI Gene
  74236

Representative Sequences			Length	Strain/Species
genomic	74236	NCBI Gene Model | MGI Sequence Detail	3634	C57BL/6J
transcript	NR_108051	RefSeq | MGI Sequence Detail	1133	C57BL/6
polypeptide	Q9DA24	UniProt | EBI | MGI Sequence Detail	160	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR007677 Gasdermin
  IPR040460 Gasdermin, pore forming domain

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 3

References

• Summaries
  All 40

  Diseases 1

  Phenotypes 25
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)