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1700017B05Rik Gene Detail
Summary
  • Symbol
    1700017B05Rik
  • Name
    RIKEN cDNA 1700017B05 gene
  • Synonyms
    D9Ertd278e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921461
    NCBI Gene: 74211
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:57160400-57169895 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 30.89 cM, cytoband C
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921461
 protein coding gene Chr9:57159605-57169895 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034863
 protein coding gene Chr9:56437289-56447613 (-)
A/J MGP_AJ_G0034844
 protein coding gene Chr9:54622548-54632913 (-)
AKR/J MGP_AKRJ_G0034773
 protein coding gene Chr9:55889332-55899646 (-)
BALB/cJ MGP_BALBcJ_G0034836
 protein coding gene Chr9:54413994-54424271 (-)
C3H/HeJ MGP_C3HHeJ_G0034546
 protein coding gene Chr9:56360113-56374519 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035355
 protein coding gene Chr9:58028893-58039206 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032266
 protein coding gene Chr9:53948584-53958800 (-)
CAST/EiJ MGP_CASTEiJ_G0033867
 protein coding gene Chr9:56439701-56449969 (-)
CBA/J MGP_CBAJ_G0034517
 protein coding gene Chr9:60059825-60070092 (-)
DBA/2J MGP_DBA2J_G0034676
 protein coding gene Chr9:54501702-54512479 (-)
FVB/NJ MGP_FVBNJ_G0034618
 protein coding gene Chr9:53720988-53731321 (-)
LP/J MGP_LPJ_G0034759
 protein coding gene Chr9:56733098-56743415 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034661
 protein coding gene Chr9:61526840-61537141 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035377
 protein coding gene Chr9:55908112-55918415 (-)
PWK/PhJ MGP_PWKPhJ_G0033572
 protein coding gene Chr9:54524827-54535269 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033406
 protein coding gene Chr9:56188728-56199023 (-)
WSB/EiJ MGP_WSBEiJ_G0033980
 protein coding gene Chr9:55837342-55847655 (-)



Homology
more
  • Human Ortholog
    C15orf39, chromosome 15 open reading frame 39
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C15orf39, chromosome 15 open reading frame 39
  • Links
    NCBI Gene ID: 56905
    neXtProt AC: NX_Q6ZRI6
    UniProt: Q6ZRI6

  • Chr Location
    15q24.2; chr15:75195643-75212169 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    81
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032300 Ensembl Gene Model | MGI Sequence Detail 9496 C57BL/6J ±  kb
transcript ENSMUST00000034846 Ensembl | MGI Sequence Detail 4152 Not Applicable  
polypeptide ENSMUSP00000034846 Ensembl | MGI Sequence Detail 1023 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 84
    cDNA 83
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1196263, MGI:2142962
References
more
  • Summaries
    All 32
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/19/2023
MGI 6.22 		The Jackson Laboratory