4930428N03Rik Gene Detail

Summary

• Symbol
  4930428N03Rik
• Name
  RIKEN cDNA 4930428N03 gene
• Synonyms
  4930525N24Rik

• Feature Type
  lncRNA gene
• IDs
  MGI:1921121
  NCBI Gene: 73871
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:24667617-24821513 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 14.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4005 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921121	lncRNA gene	Chr14:24667617-24821513 (+)
129S1/SvImJ	ENSMUSG00200015168	lncRNA gene	Chr14:16481108-16602421 (+)
A/J	ENSMUSG00195023452	lncRNA gene	Chr14:17548831-17672025 (+)
AKR/J	ENSMUSG00220028161	lncRNA gene	Chr14:16648629-16769961 (+)
BALB/cJ	ENSMUSG00180039511	lncRNA gene	Chr14:16640776-16763969 (+)
C3H/HeJ	ENSMUSG00175024922	lncRNA gene	Chr14:16708551-16829860 (+)
C57BL/6NJ	ENSMUSG00215036229	lncRNA gene	Chr14:16947122-17068455 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005021	lincRNA gene	Chr14:17340098-17346810 (+)
CAST/EiJ	ENSTCUG00005032081	lncRNA gene	Chr14:16805419-16926948 (+)
CBA/J	ENSMUSG00210027411	lncRNA gene	Chr14:16943341-17064643 (+)
DBA/2J	ENSMUSG00185043796	lncRNA gene	Chr14:21228445-21349781 (+)
FVB/NJ	ENSMUSG00205037816	lncRNA gene	Chr14:16770271-16891576 (+)
JF1/MsJ	ENSUMUG00000051978	lncRNA gene	Chr14:28452557-28574917 (+)
LP/J	ENSMUSG00230040640	lncRNA gene	Chr14:28510213-28631505 (+)
NOD/ShiLtJ	ENSMUSG00190038508	lncRNA gene	Chr14:16937753-17059112 (+)
NZO/HlLtJ	ENSMUSG00225037591	lncRNA gene	Chr14:22733540-22854861 (+)
PWK/PhJ	ENSLUMG00010021644	lncRNA gene	Chr14:5070596-5192894 (+)
SPRET/EiJ	ENSMSPG00010032916	lncRNA gene	Chr14:18597407-18725851 (+)
WSB/EiJ	ENSIUOG00005032891	lncRNA gene	Chr14:16782525-16903846 (+)

Homology

• Gene Tree
  4930428N03Rik
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  54

• Ensembl
  ENSMUSG00000089887 (Evidence)
• NCBI Gene
  73871

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089887	Ensembl Gene Model | MGI Sequence Detail	153897	C57BL/6J
transcript	ENSMUST00000224456	Ensembl | MGI Sequence Detail	3212	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:1925272

References

• Summaries
  All 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573