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Pldi Gene Detail
Summary
  • Symbol
    Pldi
  • Name
    polymorphic derived intron containing
  • Synonyms
    1700125F08Rik, Poldi
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920866
    NCBI Gene: 73616
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:60764005-60773911 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 32.01 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    318 from dbSNP Build 142
  • Strain Annotations
    31
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920866
 lncRNA gene Chr10:60763991-60773945 (-)
129S1/SvImJ ENSMUSG00200025038
 protein coding gene Chr10:57429820-57439906 (-)
129S1/SvImJ ENSMUSG00200029118
 lncRNA gene Chr10:57429950-57439844 (-)
A/J ENSMUSG00195027377
 protein coding gene Chr10:57742298-57752394 (-)
A/J ENSMUSG00195028894
 lncRNA gene Chr10:57742428-57752332 (-)
AKR/J ENSMUSG00220035620
 protein coding gene Chr10:57434486-57444584 (-)
AKR/J ENSMUSG00220042442
 lncRNA gene Chr10:57434616-57444522 (-)
BALB/cJ ENSMUSG00180022281
 protein coding gene Chr10:57784608-57794708 (-)
BALB/cJ ENSMUSG00180028777
 lncRNA gene Chr10:57784738-57794646 (-)
C3H/HeJ ENSMUSG00175025968
 lncRNA gene Chr10:57637198-57647092 (-)
C3H/HeJ ENSMUSG00175023558
 protein coding gene Chr10:57637068-57647154 (-)
C57BL/6NJ ENSMUSG00215034313
 lncRNA gene Chr10:57382843-57392751 (-)
C57BL/6NJ ENSMUSG00215028080
 protein coding gene Chr10:57382713-57392813 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004639
 lincRNA gene Chr10:55411902-55421856 (-)
CAST/EiJ ENSTCUG00005030467
 lncRNA gene Chr10:57429720-57439688 (-)
CBA/J ENSMUSG00210039259
 lncRNA gene Chr10:57515511-57525405 (-)
CBA/J ENSMUSG00210031255
 protein coding gene Chr10:57515381-57525467 (-)
DBA/2J ENSMUSG00185042902
 lncRNA gene Chr10:57862262-57872168 (-)
DBA/2J ENSMUSG00185038379
 protein coding gene Chr10:57862132-57872230 (-)
FVB/NJ ENSMUSG00205035055
 lncRNA gene Chr10:57535827-57545733 (-)
FVB/NJ ENSMUSG00205024279
 protein coding gene Chr10:57535697-57545795 (-)
JF1/MsJ ENSUMUG00000021436
 lncRNA gene Chr10:59097362-59107333 (-)
LP/J ENSMUSG00230020776
 protein coding gene Chr10:59665289-59675387 (-)
LP/J ENSMUSG00230023520
 lncRNA gene Chr10:59665419-59675325 (-)
NOD/ShiLtJ ENSMUSG00190033163
 protein coding gene Chr10:57847950-57858036 (-)
NOD/ShiLtJ ENSMUSG00190037193
 lncRNA gene Chr10:57848080-57857974 (-)
NZO/HlLtJ ENSMUSG00225045646
 lncRNA gene Chr10:63946353-63956259 (-)
NZO/HlLtJ ENSMUSG00225044386
 protein coding gene Chr10:63946223-63956321 (-)
PWK/PhJ ENSLUMG00010023667
 lncRNA gene Chr10:57452227-57462133 (-)
SPRET/EiJ ENSMSPG00010028065
 lncRNA gene Chr10:59051666-59061545 (-)
WSB/EiJ ENSIUOG00005042179
 lncRNA gene Chr10:57419673-57429575 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit reduced testis weight and decreased sperm motility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      47
    • RefSeq
      1
    • UniProt
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 73616 NCBI Gene Model | MGI Sequence Detail 9907 C57BL/6J ±  kb
    transcript NR_033616 RefSeq | MGI Sequence Detail 853 C57BL/6  
    polypeptide Q9D980 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    Molecular
    Reagents
    less
    • All nucleic 4
      cDNA 4

      Microarray probesets 2
    References
    more
    • Summaries
      All 22
      Gene Ontology 1
      Phenotypes 7
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:154651 Heinen TJ, et al., Emergence of a new gene from an intergenic region. Curr Biol. 2009 Sep 29;19(18):1527-31
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory