About   Help   FAQ
1700096K18Rik Gene Detail
Summary
  • Symbol
    1700096K18Rik
  • Name
    RIKEN cDNA 1700096K18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920821
    NCBI Gene: 73571
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:25735016-25736464 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 12.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920821
 lncRNA gene Chr5:25734900-25736475 (+)
129S1/SvImJ ENSMUSG00200014652
 lncRNA gene Chr5:21338564-21340011 (+)
A/J ENSMUSG00195050007
 lncRNA gene Chr5:20800922-20802375 (+)
AKR/J ENSMUSG00220009572
 lncRNA gene Chr5:20894465-20895918 (+)
BALB/cJ ENSMUSG00180037171
 lncRNA gene Chr5:20680795-20682248 (+)
C3H/HeJ ENSMUSG00175048080
 lncRNA gene Chr5:22609667-22611120 (+)
C57BL/6NJ ENSMUSG00215042146
 lncRNA gene Chr5:21254298-21255751 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005995
 lincRNA gene Chr5:20429637-20431062 (+)
CAST/EiJ ENSTCUG00005024693
 lncRNA gene Chr5:20810041-20811494 (+)
CBA/J ENSMUSG00210048893
 lncRNA gene Chr5:21638373-21639826 (+)
DBA/2J ENSMUSG00185037927
 lncRNA gene Chr5:23168767-23170219 (+)
FVB/NJ ENSMUSG00205034542
 lncRNA gene Chr5:20453508-20454961 (+)
JF1/MsJ ENSUMUG00000007028
 lncRNA gene Chr5:27739185-27740635 (+)
LP/J ENSMUSG00230025822
 lncRNA gene Chr5:27620523-27621970 (+)
NOD/ShiLtJ ENSMUSG00190015808
 lncRNA gene Chr5:20725737-20727189 (+)
NZO/HlLtJ ENSMUSG00225020647
 lncRNA gene Chr5:33022130-33023582 (+)
PWK/PhJ ENSLUMG00010048415
 lncRNA gene Chr5:20779168-20780619 (+)
SPRET/EiJ ENSMSPG00010043565
 lncRNA gene Chr5:21648483-21649928 (+)
WSB/EiJ ENSIUOG00005043807
 lncRNA gene Chr5:23535842-23537292 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Gene trapped
    5
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving 1700096K18Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73571 NCBI Gene Model | MGI Sequence Detail 1449 C57BL/6J ±  kb
transcript NR_027388 RefSeq | MGI Sequence Detail 1463 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Diseases 1
    Phenotypes 13
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory