Cntrobos Gene Detail

Summary

• Symbol
  Cntrobos
• Name
  centrobin, centrosomal BRCA2 interacting protein, opposite strand
• Synonyms
  1700067G03Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1920671
  NCBI Gene: 73421
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:69156420-69186303 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 42.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920671	antisense lncRNA gene	Chr11:69156420-69186303 (+)
129S1/SvImJ	ENSMUSG00200049950	lncRNA gene	Chr11:66130568-66131894 (+)
A/J	ENSMUSG00195053259	lncRNA gene	Chr11:66155917-66157243 (+)
AKR/J	ENSMUSG00220054260	lncRNA gene	Chr11:66263870-66265201 (+)
BALB/cJ	ENSMUSG00180054089	lncRNA gene	Chr11:66227548-66228874 (+)
C3H/HeJ	ENSMUSG00175054452	lncRNA gene	Chr11:66177858-66179184 (+)
C57BL/6NJ	ENSMUSG00215055154	lncRNA gene	Chr11:65953947-65955273 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053738	lncRNA gene	Chr11:65712298-65713624 (+)
CBA/J	ENSMUSG00210054325	lncRNA gene	Chr11:66031926-66033252 (+)
DBA/2J	ENSMUSG00185056931	lncRNA gene	Chr11:66232078-66233404 (+)
FVB/NJ	ENSMUSG00205053920	lncRNA gene	Chr11:66122645-66123971 (+)
JF1/MsJ	ENSUMUG00000057171	lncRNA gene	Chr11:66630259-66631585 (+)
LP/J	ENSMUSG00230053773	lncRNA gene	Chr11:67340930-67342256 (+)
NOD/ShiLtJ	ENSMUSG00190054307	lncRNA gene	Chr11:66260298-66261624 (+)
NZO/HlLtJ	ENSMUSG00225048661	lncRNA gene	Chr11:69521443-69522769 (+)
PWK/PhJ	ENSLUMG00010053716	lncRNA gene	Chr11:66146445-66147771 (+)
SPRET/EiJ	ENSMSPG00010049761	lncRNA gene	Chr11:66876497-66877879 (+)
WSB/EiJ	ENSIUOG00005052621	lncRNA gene	Chr11:66159628-66160954 (+)

Homology

• Gene Tree
  Cntrobos
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Cntrobos
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000087003 (Evidence)
• NCBI Gene
  73421

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087003	Ensembl Gene Model | MGI Sequence Detail	29884	C57BL/6J
transcript	ENSMUST00000358618	Ensembl | MGI Sequence Detail	535	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573