1700060C20Rik MGI Mouse Gene Detail - MGI:1920649

Sequence Map

Chr2:158033928-158037657 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920649	lncRNA gene	Chr2:158033831-158037685 (+)
129S1/SvImJ	ENSMUSG00200017432	lncRNA gene	Chr2:154896221-154899974 (+)
A/J	ENSMUSG00195021883	lncRNA gene	Chr2:155265728-155269459 (+)
AKR/J	ENSMUSG00220014100	lncRNA gene	Chr2:154594217-154597967 (+)
BALB/cJ	ENSMUSG00180049350	lncRNA gene	Chr2:154718679-154722420 (+)
C3H/HeJ	ENSMUSG00175051127	lncRNA gene	Chr2:155468840-155472581 (+)
C57BL/6NJ	ENSMUSG00215039377	lncRNA gene	Chr2:154883528-154887269 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003297	antisense lncRNA gene	Chr2:150153415-150157202 (+)
CAST/EiJ	ENSTCUG00005046814	lncRNA gene	Chr2:153867644-153871384 (+)
CBA/J	ENSMUSG00210017419	lncRNA gene	Chr2:155399939-155403680 (+)
DBA/2J	ENSMUSG00185050298	lncRNA gene	Chr2:155118475-155122225 (+)
FVB/NJ	ENSMUSG00205044898	lncRNA gene	Chr2:154151026-154154767 (+)
JF1/MsJ	ENSUMUG00000034700	lncRNA gene	Chr2:154769547-154773285 (+)
LP/J	ENSMUSG00230046405	lncRNA gene	Chr2:156693759-156697513 (+)
NOD/ShiLtJ	ENSMUSG00190048026	lncRNA gene	Chr2:154793940-154797681 (+)
NZO/HlLtJ	ENSMUSG00225053929	lncRNA gene	Chr2:164709287-164713038 (+)
PWK/PhJ	ENSLUMG00010048909	lncRNA gene	Chr2:154711840-154715590 (+)
SPRET/EiJ	ENSMSPG00010038950	lncRNA gene	Chr2:157469525-157473264 (+)
WSB/EiJ	ENSIUOG00005047628	lncRNA gene	Chr2:154486539-154490272 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	73399	NCBI Gene Model \| MGI Sequence Detail	3730	C57BL/6J	± kb
	transcript	NR_036606	RefSeq \| MGI Sequence Detail	593	C57BL/6

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Summaries

All 14

Phenotypes 3
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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