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1700049L16Rik Pseudogene Detail
Summary
  • Symbol
    1700049L16Rik
  • Name
    RIKEN cDNA 1700049L16 gene
Location &
Maps
more
  • Sequence Map
    Chr10:71815712-71816524 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 37.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920633
 pseudogene Chr10:71815712-71816535 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010528
 pseudogene Chr10:71999941-72000745 (-)
A/J MGP_AJ_G0010521
 pseudogene Chr10:69531137-69531941 (-)
AKR/J MGP_AKRJ_G0010481
 pseudogene Chr10:71439424-71440228 (-)
BALB/cJ MGP_BALBcJ_G0010495
 pseudogene Chr10:69719914-69720718 (-)
C3H/HeJ MGP_C3HHeJ_G0010419
 pseudogene Chr10:71418841-71419645 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010763
 pseudogene Chr10:74493004-74493808 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009432
 pseudogene Chr10:65995737-65996543 (-)
CAST/EiJ MGP_CASTEiJ_G0010244
 pseudogene Chr10:71567604-71568408 (-)
CBA/J MGP_CBAJ_G0010388
 pseudogene Chr10:77432792-77433596 (-)
DBA/2J MGP_DBA2J_G0010421
 pseudogene Chr10:68876024-68876828 (-)
FVB/NJ MGP_FVBNJ_G0010437
 pseudogene Chr10:68031030-68031834 (-)
LP/J MGP_LPJ_G0010510
 pseudogene Chr10:72425324-72426128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010408
 pseudogene Chr10:79469884-79470688 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010736
 pseudogene Chr10:71381554-71382358 (-)
PWK/PhJ MGP_PWKPhJ_G0010143
 pseudogene Chr10:68685458-68686261 (-)
SPRET/EiJ MGP_SPRETEiJ_G0009956
 pseudogene Chr10:70716094-70716896 (-)
WSB/EiJ MGP_WSBEiJ_G0010307
 pseudogene Chr10:71369842-71370646 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700049L16Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043859 Ensembl Gene Model | MGI Sequence Detail 813 C57BL/6J ±  kb
transcript ENSMUST00000049520 Ensembl | MGI Sequence Detail 813 Not Applicable  
polypeptide ENSMUSP00000160185 Ensembl | MGI Sequence Detail 180 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR033335 Microtubule-associated protein Jupiter
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/14/2026
MGI 6.24 		The Jackson Laboratory