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1700039I01Rik Gene Detail
Summary
  • Symbol
    1700039I01Rik
  • Name
    RIKEN cDNA 1700039I01 gene
Location &
Maps
more
  • Sequence Map
    Chr1:63287180-63287658 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    71 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920596
 lncRNA gene Chr1:63287173-63292355 (-)
129S1/SvImJ ENSMUSG00200005069
 unclassified gene Chr1:60794703-60795181 (-)
A/J ENSMUSG00195029351
 unclassified gene Chr1:60316164-60316642 (-)
AKR/J ENSMUSG00220040667
 unclassified gene Chr1:60438949-60439427 (-)
BALB/cJ ENSMUSG00180032667
 unclassified gene Chr1:60611266-60611744 (-)
C3H/HeJ ENSMUSG00175000911
 unclassified gene Chr1:60710811-60711289 (-)
C57BL/6NJ ENSMUSG00215022295
 unclassified gene Chr1:60637000-60637478 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000300
 unclassified gene Chr1:57264307-57264782 (-)
CAST/EiJ ENSTCUG00005013835
 unclassified gene Chr1:60474911-60475389 (-)
CBA/J ENSMUSG00210054158
 unclassified gene Chr1:60386685-60387163 (-)
DBA/2J ENSMUSG00185005103
 unclassified gene Chr1:61503556-61504034 (-)
FVB/NJ ENSMUSG00205022059
 unclassified gene Chr1:60339795-60340273 (-)
JF1/MsJ ENSUMUG00000046815
 unclassified gene Chr1:60458018-60458496 (-)
LP/J ENSMUSG00230002717
 unclassified gene Chr1:61503917-61504395 (-)
NOD/ShiLtJ ENSMUSG00190014653
 unclassified gene Chr1:60570642-60571120 (-)
NZO/HlLtJ ENSMUSG00225001316
 unclassified gene Chr1:64728573-64729051 (-)
PWK/PhJ ENSLUMG00010025837
 unclassified gene Chr1:59976012-59976490 (-)
SPRET/EiJ ENSMSPG00010019468
 unclassified gene Chr1:61976070-61976548 (-)
WSB/EiJ ENSIUOG00005021723
 unclassified gene Chr1:60186386-60186864 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700039I01Rik
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102536 Ensembl Gene Model | MGI Sequence Detail 479 C57BL/6J ±  kb
transcript AK006642 GenBank | ENA | DDBJ | MGI Sequence Detail 480 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory