Speer6-ps1 Pseudogene Detail

Summary

• Symbol
  Speer6-ps1
• Name
  spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
• Synonyms
  1700039A02Rik, SPEER-6

• Feature Type
  pseudogene
• IDs
  MGI:1920516
  NCBI Gene: 73266
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:3236206-3239317 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 1.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  53 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920516	pseudogene	Chr13:3199475-3239678 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Speer6-ps1
  

Human Diseases

• Mutations/Alleles
  1 with disease annotations

• References
  22 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  445 phenotypes from multigenic genotypes
  28 images
  1455 phenotype references
  

• All Mutations and Alleles
  1
• Transgenic
  1
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  1

• Ensembl
  ENSMUSG00000091304 (Evidence)
• NCBI Gene
  73266

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091304	Ensembl Gene Model | MGI Sequence Detail	3112	C57BL/6J
transcript	ENSMUST00000168736	Ensembl | MGI Sequence Detail	545	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 3

Other
Accession IDs

MGI:2176226

References

• Summaries
  All 1468

  Diseases 22

  Phenotypes 1455
• Earliest
  J:51826 Postic C, et al., Dual roles for glucokinase in glucose homeostasis as determined by liver and pancreatic beta cell-specific gene knock-outs using Cre recombinase. J Biol Chem. 1999 Jan 1;274(1):305-15
• Latest
  J:346743 Deja S, et al., Hepatic malonyl-CoA synthesis restrains gluconeogenesis by suppressing fat oxidation, pyruvate carboxylation, and amino acid availability. Cell Metab. 2024 Mar 1;