Speer6-ps1 Pseudogene Detail

Summary

• Symbol
  Speer6-ps1
• Name
  spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
• Synonyms
  1700039A02Rik, SPEER-6

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:1920516
  NCBI Gene: 73266
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:3199475-3239678 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 1.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  641 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920516	pseudogene	Chr13:3199425-3242491 (+)
129S1/SvImJ	ENSMUSG00200007187	pseudogene	Chr13:369199-409345 (+)
A/J	no annotation
AKR/J	ENSMUSG00220013176	pseudogene	Chr13:59963-100102 (+)
BALB/cJ	ENSMUSG00180009616	pseudogene	Chr13:189558-229707 (+)
C3H/HeJ	ENSMUSG00175008568	pseudogene	Chr13:221126-261330 (+)
C57BL/6NJ	ENSMUSG00215018219	pseudogene	Chr13:440939-481142 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024590	pseudogene	Chr13:437888-469177 (+)
CBA/J	ENSMUSG00210002693	pseudogene	Chr5:73946-106452 (+)
DBA/2J	ENSMUSG00185024696	pseudogene	Chr13:447598-487802 (+)
FVB/NJ	ENSMUSG00205025805	pseudogene	Chr13:191217-231364 (+)
JF1/MsJ	ENSUMUG00000011706	pseudogene	Chr13:428993-460614 (+)
LP/J	ENSMUSG00230009824	pseudogene	Chr13:9901672-9933288 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225034687	pseudogene	Chr13:3789279-3820899 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Diseases

• Mutations/Alleles
  1 with disease annotations

• References
  24 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  465 phenotypes from multigenic genotypes
  28 images
  1955 phenotype references
  

• All Mutations and Alleles
  1
• Transgenic
  1
• Find Mice (IMSR)
  4 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  1

• Ensembl
  ENSMUSG00000091304 (Evidence), ENSMUSG00000121349 (Evidence)
• NCBI Gene
  73266

Representative Sequences			Length	Strain/Species
genomic	73266	NCBI Gene Model | MGI Sequence Detail	40204	C57BL/6J
transcript	NR_001581	RefSeq | MGI Sequence Detail	979	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 3

Other
Accession IDs

MGI:2176226

References

• Summaries
  All 1968

  Diseases 24

  Phenotypes 1955
• Earliest
  J:51826 Postic C, et al., Dual roles for glucokinase in glucose homeostasis as determined by liver and pancreatic beta cell-specific gene knock-outs using Cre recombinase. J Biol Chem. 1999 Jan 1;274(1):305-15
• Latest
  J:391717 Huang X, et al., Liver-originated selective autophagy of BTD by alectinib underlies concurrent hepatotoxicity and dermatotoxicity. Autophagy. 2026 Sep;22(9):2424-2449