2900092O11Rik Gene Detail

Summary

• Symbol
  2900092O11Rik
• Name
  RIKEN cDNA 2900092O11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1920315
  NCBI Gene: 73065
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:184175177-184175931 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920315	lncRNA gene	Chr1:184175177-184175931 (+)
129S1/SvImJ	ENSMUSG00200023183	unclassified gene	Chr1:181960982-181961736 (+)
A/J	ENSMUSG00195043218	unclassified gene	Chr1:181543851-181544605 (+)
AKR/J	ENSMUSG00220021167	unclassified gene	Chr1:180760934-180761688 (+)
BALB/cJ	ENSMUSG00180038266	unclassified gene	Chr1:181610019-181610773 (+)
C3H/HeJ	ENSMUSG00175040722	unclassified gene	Chr1:181785527-181786281 (+)
C57BL/6NJ	ENSMUSG00215033928	unclassified gene	Chr1:180990279-180991033 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000559	unclassified gene	Chr1:174326445-174327193 (+)
CAST/EiJ	ENSTCUG00005044067	unclassified gene	Chr1:179550657-179551410 (+)
CBA/J	ENSMUSG00210019375	unclassified gene	Chr1:181437831-181438585 (+)
DBA/2J	ENSMUSG00185036901	unclassified gene	Chr1:186052543-186053297 (+)
FVB/NJ	ENSMUSG00205037205	unclassified gene	Chr1:180484785-180485539 (+)
JF1/MsJ	ENSUMUG00000006596	unclassified gene	Chr1:185046659-185047411 (+)
LP/J	ENSMUSG00230025117	unclassified gene	Chr1:185617601-185618355 (+)
NOD/ShiLtJ	ENSMUSG00190035406	unclassified gene	Chr1:181459991-181460745 (+)
NZO/HlLtJ	ENSMUSG00225011980	unclassified gene	Chr1:189348988-189349742 (+)
PWK/PhJ	ENSLUMG00010017043	unclassified gene	Chr1:180307958-180308712 (+)
SPRET/EiJ	ENSMSPG00010038103	unclassified gene	Chr1:183811228-183811975 (+)
WSB/EiJ	ENSIUOG00005011858	unclassified gene	Chr1:180650290-180651044 (+)

Homology

• Gene Tree
  2900092O11Rik
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104419 (Evidence)
• NCBI Gene
  73065

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104419	Ensembl Gene Model | MGI Sequence Detail	755	C57BL/6J
transcript	AK013844	GenBank | ENA | DDBJ | MGI Sequence Detail	755	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573