2900069G24Rik Gene Detail

Summary

• Symbol
  2900069G24Rik
• Name
  RIKEN cDNA 2900069G24 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1920218
  NCBI Gene: 72968
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:181208743-181210053 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920218	lncRNA gene	Chr1:181208743-181210053 (+)
129S1/SvImJ	ENSMUSG00200024049	unclassified gene	Chr1:178962672-178963982 (+)
A/J	ENSMUSG00195044361	unclassified gene	Chr1:178572606-178573916 (+)
AKR/J	ENSMUSG00220021715	unclassified gene	Chr1:177814146-177815456 (+)
BALB/cJ	ENSMUSG00180039372	unclassified gene	Chr1:178613919-178615229 (+)
C3H/HeJ	ENSMUSG00175042369	unclassified gene	Chr1:178789679-178790989 (+)
C57BL/6NJ	ENSMUSG00215026315	unclassified gene	Chr1:178015405-178016715 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000549	unclassified gene	Chr1:171255993-171257741 (+)
CAST/EiJ	ENSTCUG00005043062	unclassified gene	Chr1:176541820-176543136 (+)
CBA/J	ENSMUSG00210019353	unclassified gene	Chr1:178454079-178455389 (+)
DBA/2J	ENSMUSG00185038067	unclassified gene	Chr1:183073486-183074796 (+)
FVB/NJ	ENSMUSG00205039925	unclassified gene	Chr1:177510463-177511773 (+)
JF1/MsJ	ENSUMUG00000006331	unclassified gene	Chr1:182060837-182062153 (+)
LP/J	ENSMUSG00230033518	unclassified gene	Chr1:182621959-182623269 (+)
NOD/ShiLtJ	ENSMUSG00190040501	unclassified gene	Chr1:178475502-178476812 (+)
NZO/HlLtJ	ENSMUSG00225011377	unclassified gene	Chr1:186381238-186382548 (+)
PWK/PhJ	ENSLUMG00010017255	unclassified gene	Chr1:177322353-177323663 (+)
SPRET/EiJ	ENSMSPG00010034900	unclassified gene	Chr1:180796453-180797769 (+)
WSB/EiJ	ENSIUOG00005011793	unclassified gene	Chr1:177681011-177682321 (+)

Homology

• Gene Tree
  2900069G24Rik
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102276 (Evidence)
• NCBI Gene
  72968

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102276	Ensembl Gene Model | MGI Sequence Detail	1311	C57BL/6J
transcript	AK013757	GenBank | ENA | DDBJ | MGI Sequence Detail	1328	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573