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2900009J06Rik Gene Detail
Summary
  • Symbol
    2900009J06Rik
  • Name
    RIKEN cDNA 2900009J06 gene
Location &
Maps
more
  • Sequence Map
    Chr1:127681354-127701791 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 55.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920137
 lncRNA gene Chr1:127681353-127701829 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002733
 antisense lncRNA gene Chr1:130972122-130993937 (-)
A/J MGP_AJ_G0002709
 antisense lncRNA gene Chr1:126091728-126112203 (-)
AKR/J MGP_AKRJ_G0002690
 antisense lncRNA gene Chr1:129801566-129822776 (-)
BALB/cJ MGP_BALBcJ_G0002696
 antisense lncRNA gene Chr1:126468990-126489489 (-)
C3H/HeJ MGP_C3HHeJ_G0002655
 antisense lncRNA gene Chr1:129987050-130009013 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002839
 antisense lncRNA gene Chr1:135899627-135920058 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002387
 antisense lncRNA gene Chr1:119452738-119472353 (-)
CAST/EiJ MGP_CASTEiJ_G0002627
 antisense lncRNA gene Chr1:128948744-128969144 (-)
CBA/J MGP_CBAJ_G0002650
 antisense lncRNA gene Chr1:140478559-140499026 (-)
DBA/2J MGP_DBA2J_G0002656
 antisense lncRNA gene Chr1:125127947-125148546 (-)
FVB/NJ MGP_FVBNJ_G0002676
 antisense lncRNA gene Chr1:123845832-123866258 (-)
LP/J MGP_LPJ_G0002735
 antisense lncRNA gene Chr1:132324577-132346261 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002666
 antisense lncRNA gene Chr1:146349480-146370824 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002844
 antisense lncRNA gene Chr1:129591277-129616460 (-)
PWK/PhJ MGP_PWKPhJ_G0002585
 antisense lncRNA gene Chr1:124101784-124122765 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002536
 antisense lncRNA gene Chr1:128542865-128565517 (-)
WSB/EiJ MGP_WSBEiJ_G0002657
 antisense lncRNA gene Chr1:129539577-129563298 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    83
  • Chemically induced (other)
    2
  • Gene trapped
    80
  • Radiation induced
    1
  • Genomic Mutations
    3 involving 2900009J06Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100502745 NCBI Gene Model | MGI Sequence Detail 20438 C57BL/6J ±  kb
transcript NR_045298 RefSeq | MGI Sequence Detail 468 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 7
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory