2810471M01Rik Gene Detail

Summary

• Symbol
  2810471M01Rik
• Name
  RIKEN cDNA 2810471M01 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1920068
  NCBI Gene: 72818
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:28631564-28643276 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 16.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  352 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920068	lncRNA gene	Chr11:28631564-28765980 (+)
129S1/SvImJ	ENSMUSG00200010078	lncRNA gene	Chr11:25664102-25675816 (+)
A/J	ENSMUSG00195014366	lncRNA gene	Chr11:25567639-25578889 (+)
AKR/J	ENSMUSG00220008689	lncRNA gene	Chr11:25746107-25757817 (+)
BALB/cJ	ENSMUSG00180008209	lncRNA gene	Chr11:25561216-25572924 (+)
C3H/HeJ	ENSMUSG00175016824	lncRNA gene	Chr11:25585783-25597033 (+)
C57BL/6NJ	ENSMUSG00215011666	lncRNA gene	Chr11:25535276-25546991 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004709	lincRNA gene	Chr11:24370017-24381678 (+)
CAST/EiJ	ENSTCUG00005029632	lncRNA gene	Chr11:25442128-25453381 (+)
CBA/J	ENSMUSG00210010086	lncRNA gene	Chr11:25545941-25557701 (+)
DBA/2J	ENSMUSG00185019246	lncRNA gene	Chr11:25653856-25665106 (+)
FVB/NJ	ENSMUSG00205023510	lncRNA gene	Chr11:25613175-25624885 (+)
JF1/MsJ	ENSUMUG00000010806	lncRNA gene	Chr11:25898930-25910196 (+)
LP/J	ENSMUSG00230016040	lncRNA gene	Chr11:26782452-26794160 (+)
NOD/ShiLtJ	ENSMUSG00190025186	lncRNA gene	Chr11:25753847-25765555 (+)
NZO/HlLtJ	ENSMUSG00225022541	lncRNA gene	Chr11:28739304-28750553 (+)
PWK/PhJ	ENSLUMG00010017591	lncRNA gene	Chr11:25539307-25550561 (+)
SPRET/EiJ	ENSMSPG00010020882	lncRNA gene	Chr11:25866802-25878507 (+)
WSB/EiJ	ENSIUOG00005013489	lncRNA gene	Chr11:25619585-25631286 (+)

Homology

• Gene Tree
  2810471M01Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 2810471M01Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000084966 (Evidence)
• NCBI Gene
  72818

Representative Sequences			Length	Strain/Species
genomic	72818	NCBI Gene Model | MGI Sequence Detail	11713	C57BL/6J
transcript	NR_045906	RefSeq | MGI Sequence Detail	1597	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 14

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573