2810036E18Rik Gene Detail

Summary

• Symbol
  2810036E18Rik
• Name
  RIKEN cDNA 2810036E18 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1919944
  NCBI Gene: 72694
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:130115245-130116714 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1919944	lncRNA gene	Chr2:130115245-130116714 (-)
129S1/SvImJ	ENSMUSG00200049223	lncRNA gene	Chr2:127156632-127157565 (-)
A/J	ENSMUSG00195032462	lncRNA gene	Chr2:127191058-127191991 (-)
AKR/J	ENSMUSG00220044879	lncRNA gene	Chr2:126950102-126951035 (-)
BALB/cJ	ENSMUSG00180050393	lncRNA gene	Chr2:127004621-127005560 (-)
C3H/HeJ	ENSMUSG00175048510	lncRNA gene	Chr2:127538683-127539590 (-)
C57BL/6NJ	ENSMUSG00215037957	lncRNA gene	Chr2:127039176-127040109 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040008	lncRNA gene	Chr2:126313556-126314482 (-)
CBA/J	ENSMUSG00210036631	lncRNA gene	Chr2:127395589-127396496 (-)
DBA/2J	ENSMUSG00185036766	lncRNA gene	Chr2:127044036-127044969 (-)
FVB/NJ	ENSMUSG00205044266	lncRNA gene	Chr2:126210704-126211611 (-)
JF1/MsJ	ENSUMUG00000026878	lncRNA gene	Chr2:126858281-126859207 (-)
LP/J	ENSMUSG00230039345	lncRNA gene	Chr2:128791828-128792761 (-)
NOD/ShiLtJ	ENSMUSG00190015255	lncRNA gene	Chr2:127149420-127150353 (-)
NZO/HlLtJ	ENSMUSG00225027742	lncRNA gene	Chr2:136700675-136701608 (-)
PWK/PhJ	ENSLUMG00010042296	lncRNA gene	Chr2:126820496-126821435 (-)
SPRET/EiJ	ENSMSPG00010032669	lncRNA gene	Chr2:129200645-129201677 (-)
WSB/EiJ	ENSIUOG00005045368	lncRNA gene	Chr2:126973208-126974141 (-)

Homology

• Gene Tree
  2810036E18Rik
  

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120148 (Evidence)
• NCBI Gene
  72694

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120148	Ensembl Gene Model | MGI Sequence Detail	1470	C57BL/6J
transcript	ENSMUST00000241607	Ensembl | MGI Sequence Detail	1470	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 2810036E18Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr26285	Chr2:130116147-130116204 (-)	538 bp