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Smc2os Gene Detail
Summary
  • Symbol
    Smc2os
  • Name
    structural maintenance of chromosomes 2, opposite strand
  • Synonyms
    2700081L22Rik
Location &
Maps
more
  • Sequence Map
    Chr4:52430284-52438964 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 28.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    57 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919898
 antisense lncRNA gene Chr4:52430284-52438965 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003900
 antisense lncRNA gene Chr4:51009883-51018567 (-)
A/J MGP_AJ_G0003880
 antisense lncRNA gene Chr4:49053561-49062108 (-)
AKR/J MGP_AKRJ_G0003857
 antisense lncRNA gene Chr4:50401190-50410914 (-)
BALB/cJ MGP_BALBcJ_G0003867
 antisense lncRNA gene Chr4:49234316-49243108 (-)
C3H/HeJ MGP_C3HHeJ_G0003813
 antisense lncRNA gene Chr4:50950914-50960730 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004014
 antisense lncRNA gene Chr4:52890348-52899372 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0003778
 antisense lncRNA gene Chr4:50563969-50577108 (-)
CBA/J MGP_CBAJ_G0003806
 antisense lncRNA gene Chr4:54710402-54719805 (-)
DBA/2J MGP_DBA2J_G0003823
 antisense lncRNA gene Chr4:49021974-49030693 (-)
FVB/NJ MGP_FVBNJ_G0003841
 antisense lncRNA gene Chr4:48266338-48277775 (-)
LP/J MGP_LPJ_G0003902
 antisense lncRNA gene Chr4:51108204-51116713 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003829
 antisense lncRNA gene Chr4:57919603-57929178 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004010
 antisense lncRNA gene Chr4:50637234-50646975 (-)
PWK/PhJ MGP_PWKPhJ_G0003733
 antisense lncRNA gene Chr4:48974336-48984517 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003679
 antisense lncRNA gene Chr4:49926999-49934143 (-)
WSB/EiJ MGP_WSBEiJ_G0003813
 antisense lncRNA gene Chr4:50523601-50531718 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 72648 NCBI Gene Model | MGI Sequence Detail 8681 C57BL/6J ±  kb
transcript NR_045175 RefSeq | MGI Sequence Detail 641 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory