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2700069I18Rik Gene Detail
Summary
  • Symbol
    2700069I18Rik
  • Name
    RIKEN cDNA 2700069I18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919858
    NCBI Gene: 72608
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:5242884-5285883 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 1.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1029 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919858
 lncRNA gene Chr3:5242595-5286170 (-)
129S1/SvImJ ENSMUSG00200000997
 lncRNA gene Chr3:1922181-1965466 (-)
A/J ENSMUSG00195001214
 lncRNA gene Chr3:2256379-2299647 (-)
AKR/J ENSMUSG00220017088
 lncRNA gene Chr3:2228935-2272198 (-)
BALB/cJ ENSMUSG00180007242
 lncRNA gene Chr3:2248692-2291961 (-)
C3H/HeJ ENSMUSG00175005077
 lncRNA gene Chr3:2266283-2309544 (-)
C57BL/6NJ ENSMUSG00215005390
 lncRNA gene Chr3:2236452-2279738 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003332
 antisense lncRNA gene Chr3:1607753-1652391 (-)
CAST/EiJ ENSTCUG00005000261
 lncRNA gene Chr3:2335227-2378735 (-)
CBA/J ENSMUSG00210000901
 lncRNA gene Chr3:2246562-2289833 (-)
DBA/2J ENSMUSG00185000567
 lncRNA gene Chr3:2239824-2283129 (-)
FVB/NJ ENSMUSG00205006071
 lncRNA gene Chr3:2066763-2110054 (-)
JF1/MsJ ENSUMUG00000011421
 lncRNA gene Chr3:2204575-2261043 (-)
LP/J ENSMUSG00230000115
 lncRNA gene Chr3:4162239-4205523 (-)
NOD/ShiLtJ ENSMUSG00190022860
 lncRNA gene Chr3:2240346-2283621 (-)
NZO/HlLtJ ENSMUSG00225001523
 lncRNA gene Chr3:6701197-6744477 (-)
PWK/PhJ ENSLUMG00010008345
 lncRNA gene Chr3:2237760-2281205 (-)
SPRET/EiJ ENSMSPG00010000115
 lncRNA gene Chr3:2081937-2125499 (-)
WSB/EiJ ENSIUOG00005000750
 lncRNA gene Chr3:2299137-2349708 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    35
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 72608 NCBI Gene Model | MGI Sequence Detail 43000 C57BL/6J ±  kb
transcript NR_045905 RefSeq | MGI Sequence Detail 782 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory