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Zup1 Gene Detail
Summary
  • Symbol
    Zup1
  • Name
    zinc finger containing ubiquitin peptidase 1
  • Synonyms
    2700019D07Rik, Zufsp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919830
    NCBI Gene: 72580
  • Alliance
    gene page
  • Transcription Start Sites
    14 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:33795138-33827265 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 18.85 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    191 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919830
 protein coding gene Chr10:33795138-33827316 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017130
 protein coding gene Chr10:32254706-32280122 (-)
A/J MGP_AJ_G0017107
 protein coding gene Chr10:31400976-31434256 (-)
AKR/J MGP_AKRJ_G0017067
 protein coding gene Chr10:31766939-31798851 (-)
BALB/cJ MGP_BALBcJ_G0017070
 protein coding gene Chr10:31339927-31375028 (-)
C3H/HeJ MGP_C3HHeJ_G0016890
 protein coding gene Chr10:32064025-32097139 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017528
 protein coding gene Chr10:33177084-33202226 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015225
 protein coding gene Chr10:29758123-29783211 (-)
CAST/EiJ MGP_CASTEiJ_G0016469
 protein coding gene Chr10:32186278-32218474 (-)
CBA/J MGP_CBAJ_G0016864
 protein coding gene Chr10:34777695-34809495 (-)
DBA/2J MGP_DBA2J_G0016969
 protein coding gene Chr10:30984811-31017325 (-)
FVB/NJ MGP_FVBNJ_G0016964
 protein coding gene Chr10:30490409-30525073 (-)
LP/J MGP_LPJ_G0017046
 protein coding gene Chr10:32242508-32267366 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016994
 protein coding gene Chr10:35247954-35295230 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017564
 protein coding gene Chr10:31720768-31745037 (-)
PWK/PhJ MGP_PWKPhJ_G0016251
 protein coding gene Chr10:30756383-30781007 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016034
 protein coding gene Chr10:31604145-31627643 (-)
WSB/EiJ MGP_WSBEiJ_G0016532
 protein coding gene Chr10:31928398-31952614 (-)



Homology
more
  • Human Ortholog
    ZUP1, zinc finger containing ubiquitin peptidase 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZUP1, zinc finger containing ubiquitin peptidase 1
  • Synonyms
    C6orf113, DUB, ZUFSP
  • Links
    NCBI Gene ID: 221302
    neXtProt AC: NX_Q96AP4
    UniProt: Q96AP4

  • Chr Location
    6q22.1; chr6:116635618-116668794 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    714
  • Tissues
    8
  • cDNA Data
    50
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039531 Ensembl Gene Model | MGI Sequence Detail 32128 C57BL/6J ±  kb
transcript ENSMUST00000218055 Ensembl | MGI Sequence Detail 2180 Not Applicable  
polypeptide ENSMUSP00000151811 Ensembl | MGI Sequence Detail 577 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 51
    cDNA 50
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory