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2500004C02Rik Gene Detail
Summary
  • Symbol
    2500004C02Rik
  • Name
    RIKEN cDNA 2500004C02 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919576
    NCBI Gene: 72326
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:153183077-153187730 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 75.41 cM, cytoband H2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    144 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919576
 lncRNA gene Chr2:153183077-153188045 (-)
129S1/SvImJ ENSMUSG00200030592
 lncRNA gene Chr2:150097920-150102877 (-)
A/J ENSMUSG00195022305
 lncRNA gene Chr2:150374656-150379616 (-)
AKR/J ENSMUSG00220047394
 lncRNA gene Chr2:149693503-149698459 (-)
BALB/cJ ENSMUSG00180044921
 lncRNA gene Chr2:149864010-149868967 (-)
C3H/HeJ ENSMUSG00175047096
 lncRNA gene Chr2:150608249-150613206 (-)
C57BL/6NJ ENSMUSG00215034640
 lncRNA gene Chr2:150028102-150033058 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013611
 unclassified non-coding RNA gene Chr2:145222094-145227351 (-)
CAST/EiJ ENSTCUG00005043687
 lncRNA gene Chr2:148949980-148954928 (-)
CBA/J ENSMUSG00210045748
 lncRNA gene Chr2:150544762-150549719 (-)
DBA/2J ENSMUSG00185049191
 lncRNA gene Chr2:150204679-150209639 (-)
FVB/NJ ENSMUSG00205039107
 lncRNA gene Chr2:149288599-149293557 (-)
JF1/MsJ ENSUMUG00000047107
 lncRNA gene Chr2:149863412-149868372 (-)
LP/J ENSMUSG00230037076
 lncRNA gene Chr2:151846552-151851509 (-)
NOD/ShiLtJ ENSMUSG00190043077
 lncRNA gene Chr2:149962475-149967435 (-)
NZO/HlLtJ ENSMUSG00225005827
 lncRNA gene Chr2:159878807-159883763 (-)
PWK/PhJ ENSLUMG00010046112
 lncRNA gene Chr2:149835861-149840823 (-)
SPRET/EiJ ENSMSPG00010030232
 lncRNA gene Chr2:152553940-152559287 (-)
WSB/EiJ ENSIUOG00005047768
 lncRNA gene Chr2:149693082-149698037 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    41
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 72326 NCBI Gene Model | MGI Sequence Detail 4654 C57BL/6J ±  kb
transcript NR_040318 RefSeq | MGI Sequence Detail 1898 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 18
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory