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1700001J11Rik Pseudogene Detail
Summary
  • Symbol
    1700001J11Rik
  • Name
    RIKEN cDNA 1700001J11 gene
Location &
Maps
more
  • Sequence Map
    Chr9:39961854-39964321 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919474
 pseudogene Chr9:39961661-39964465 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0039753
 pseudogene Chr9:37252215-37254878 (+)
AKR/J MGP_AKRJ_G0039677
 pseudogene Chr9:37974056-37977092 (+)
BALB/cJ MGP_BALBcJ_G0039721
 pseudogene Chr9:37024455-37027134 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040284
 pseudogene Chr9:39475140-39480109 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036910
 pseudogene Chr9:36928792-36929550 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0039549
 pseudogene Chr9:37221657-37224321 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    14
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 72224 NCBI Gene Model | MGI Sequence Detail 2468 C57BL/6J ±  kb
transcript NR_033613 RefSeq | MGI Sequence Detail 2468 Not Specified  
polypeptide A0ABJ3HP09 UniProt | EBI | MGI Sequence Detail 771 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:7814861
References
more
  • Summaries
    All 12
    Gene Ontology 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/08/2026
MGI 6.24 		The Jackson Laboratory