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1700006A11Rik Gene Detail
Summary
  • Symbol
    1700006A11Rik
  • Name
    RIKEN cDNA 1700006A11 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919074
    NCBI Gene: 71824
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:124194639-124219688 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 54.68 cM, cytoband H1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    320 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919074
 protein coding gene Chr3:124194638-124219689 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027853
 protein coding gene Chr3:126738446-126763628 (-)
A/J MGP_AJ_G0027812
 protein coding gene Chr3:122433860-122460648 (-)
AKR/J MGP_AKRJ_G0027777
 protein coding gene Chr3:125613712-125638764 (-)
BALB/cJ MGP_BALBcJ_G0027824
 protein coding gene Chr3:122252934-122280128 (-)
C3H/HeJ MGP_C3HHeJ_G0027554
 protein coding gene Chr3:125958006-125984321 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028269
 protein coding gene Chr3:131320808-131345863 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025606
 protein coding gene Chr3:117808612-117833560 (-)
CAST/EiJ MGP_CASTEiJ_G0027009
 protein coding gene Chr3:125407416-125433612 (-)
CBA/J MGP_CBAJ_G0027529
 protein coding gene Chr3:135722900-135753677 (-)
DBA/2J MGP_DBA2J_G0027670
 protein coding gene Chr3:121629525-121654599 (-)
FVB/NJ MGP_FVBNJ_G0027638
 protein coding gene Chr3:119247574-119272634 (-)
LP/J MGP_LPJ_G0027780
 protein coding gene Chr3:128286643-128311774 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027668
 protein coding gene Chr3:143367323-143392769 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028325
 protein coding gene Chr3:125189460-125214505 (-)
PWK/PhJ MGP_PWKPhJ_G0026735
 protein coding gene Chr3:121333690-121359280 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026559
 protein coding gene Chr3:123258434-123283547 (-)
WSB/EiJ MGP_WSBEiJ_G0027089
 protein coding gene Chr3:125911485-125936501 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71824 NCBI Gene Model | MGI Sequence Detail 25050 C57BL/6J ±  kb
transcript NM_027939 RefSeq | MGI Sequence Detail 2159 C57BL/6  
polypeptide NP_082215 RefSeq | MGI Sequence Detail 544 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR047886 ARHGAP20-like, RhoGAP domain
    IPR000198 Rho GTPase-activating protein domain
    IPR008936 Rho GTPase activation protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Diseases 1
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory