About   Help   FAQ
Raver1 Gene Detail
Summary
  • Symbol
    Raver1
  • Name
    ribonucleoprotein, PTB-binding 1
  • Synonyms
    1300006N24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919016
    NCBI Gene: 71766
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:20985454-21003295 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 9, 7.71 cM, cytoband A3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919016
protein coding gene Chr9:20985454-21003304 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034440
protein coding gene Chr9:18256467-18274461 (-)
A/J MGP_AJ_G0034418
protein coding gene Chr9:17954465-17973460 (-)
AKR/J MGP_AKRJ_G0034345
protein coding gene Chr9:18275980-18295235 (-)
BALB/cJ MGP_BALBcJ_G0034409
protein coding gene Chr9:17847742-17866005 (-)
C3H/HeJ MGP_C3HHeJ_G0034121
protein coding gene Chr9:18585554-18603741 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034930
protein coding gene Chr9:18995275-19016433 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031860
protein coding gene Chr9:17076577-17093443 (-)
CAST/EiJ MGP_CASTEiJ_G0033444
protein coding gene Chr9:18414299-18432013 (-)
CBA/J MGP_CBAJ_G0034094
protein coding gene Chr9:19699241-19717039 (-)
DBA/2J MGP_DBA2J_G0034253
protein coding gene Chr9:17933904-17951714 (-)
FVB/NJ MGP_FVBNJ_G0034196
protein coding gene Chr9:17444141-17462119 (-)
LP/J MGP_LPJ_G0034338
protein coding gene Chr9:18430015-18448173 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034239
protein coding gene Chr9:21320686-21339474 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034950
protein coding gene Chr9:18222843-18240653 (-)
PWK/PhJ MGP_PWKPhJ_G0033150
protein coding gene Chr9:17907031-17925788 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032984
protein coding gene Chr9:18284935-18304389 (-)
WSB/EiJ MGP_WSBEiJ_G0033559
protein coding gene Chr9:17963274-17980986 (-)



Homology
more
  • Human Ortholog
    RAVER1, ribonucleoprotein, PTB binding 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RAVER1, ribonucleoprotein, PTB binding 1
  • Links
    NCBI Gene ID: 125950
    neXtProt AC: NX_Q8IY67
    UniProt: Q8IY67

  • Chr Location
    19p13.2; chr19:10316212-10333529 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 2 alleles in 2 genetic backgrounds
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit reduced long term potentiation and depression.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 71766 NCBI Gene Model | MGI Sequence Detail 17842 C57BL/6J ±  kb
    transcript NM_027911 RefSeq | MGI Sequence Detail 3476 C57BL/6  
    polypeptide Q9CW46 UniProt | EBI | MGI Sequence Detail 748 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 108
      Genomic 2
      cDNA 104
      Primer pair 1
      Other 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:3035032
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 3
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:299518 Markiewicz-Potoczny M, et al., TRF2-mediated telomere protection is dispensable in pluripotent stem cells. Nature. 2021 Jan;589(7840):110-115

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.
    last database update
    02/20/2024
    MGI 6.23
    The Jackson Laboratory