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Ankrd40 Gene Detail
Summary
  • Symbol
    Ankrd40
  • Name
    ankyrin repeat domain 40
  • Synonyms
    1110011C06Rik, 5530600A18Rik, Gcap15
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918702
    NCBI Gene: 71452
  • Alliance
    genome feature page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:94218827-94232667 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 58.90 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    285 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918702
 protein coding gene Chr11:94218827-94232673 (+)
129S1/SvImJ ENSMUSG00200020230
 protein coding gene Chr11:91467410-91481266 (+)
A/J ENSMUSG00195007362
 protein coding gene Chr11:91198848-91212723 (+)
AKR/J ENSMUSG00220011607
 protein coding gene Chr11:91451295-91465173 (+)
BALB/cJ ENSMUSG00180011219
 protein coding gene Chr11:91436603-91450459 (+)
C3H/HeJ ENSMUSG00175028469
 protein coding gene Chr11:91458403-91472284 (+)
C57BL/6NJ ENSMUSG00215026024
 protein coding gene Chr11:91033387-91047227 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016978
 protein coding gene Chr11:90053274-90068167 (+)
CAST/EiJ ENSTCUG00005015496
 protein coding gene Chr11:90888316-90902158 (+)
CBA/J ENSMUSG00210032655
 protein coding gene Chr11:91161983-91175866 (+)
DBA/2J ENSMUSG00185019424
 protein coding gene Chr11:91483204-91497042 (+)
FVB/NJ ENSMUSG00205015506
 protein coding gene Chr11:91374401-91388244 (+)
JF1/MsJ ENSUMUG00000053379
 protein coding gene Chr11:91829719-91843605 (+)
LP/J ENSMUSG00230048194
 protein coding gene Chr11:92550699-92564554 (+)
NOD/ShiLtJ ENSMUSG00190019392
 protein coding gene Chr11:91530405-91544260 (+)
NZO/HlLtJ ENSMUSG00225048810
 protein coding gene Chr11:94590736-94604572 (+)
PWK/PhJ ENSLUMG00010028440
 protein coding gene Chr11:91362958-91376889 (+)
SPRET/EiJ ENSMSPG00010025340
 protein coding gene Chr11:91869170-91883485 (+)
WSB/EiJ ENSIUOG00005007014
 protein coding gene Chr11:91312764-91326806 (+)



Homology
more
  • Human Ortholog
    ANKRD40, ankyrin repeat domain 40
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD40, ankyrin repeat domain 40
  • Links
    NCBI Gene ID: 91369
    UniProt: Q6AI12

  • Chr Location
    17q21.33; chr17:50693198-50707914 (-)  GRCh38
Human Diseases
less
  • Mutations/Alleles
    2 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from multigenic genotypes
    15 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    621
  • Tissues
    15
  • cDNA Data
    12
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020864 Ensembl Gene Model | MGI Sequence Detail 13841 C57BL/6J ±  kb
transcript ENSMUST00000107818 Ensembl | MGI Sequence Detail 3487 Not Applicable  
polypeptide ENSMUSP00000103448 Ensembl | MGI Sequence Detail 363 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000031105 ankyrin repeat domain-containing protein 40
    (term hierarchy)
  • InterPro Domains
    IPR060551 ANKRD40-like, ubiquitin-like domain
    IPR002110 Ankyrin repeat
    IPR036770 Ankyrin repeat-containing domain superfamily
    IPR039195 Ankyrin repeat domain-containing protein 40
  • GlyGen
    Q5SUE8 3 sites, 1 O-linked glycan (3 sites)
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-18682, MGI:101858, MGI:1915744
References
more
  • Summaries
    All 38
    Developmental Gene Expression 2
    Diseases 2
    Phenotypes 15
  • Earliest
    J:19885 Kambouris M, et al., Novel cDNA clones obtained by antibody screening of a mouse cerebellar cDNA expression library. Brain Res Mol Brain Res. 1994 Sep;25(3-4):183-91
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory