About   Help   FAQ
Krtap28-13 Gene Detail
Summary
  • Symbol
    Krtap28-13
  • Name
    keratin associated protein 28-13
  • Synonyms
    5530401N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918636
    NCBI Gene: 71386
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:83038651-83039642 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 42.67 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    178 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918636
 protein coding gene Chr1:83038651-83039642 (+)
129S1/SvImJ ENSMUSG00200034119
 protein coding gene Chr1:80712752-80713743 (+)
A/J ENSMUSG00195009297
 protein coding gene Chr1:80115266-80116257 (+)
AKR/J ENSMUSG00220010203
 protein coding gene Chr1:80298819-80299810 (+)
BALB/cJ ENSMUSG00180016039
 protein coding gene Chr1:80386972-80387963 (+)
C3H/HeJ ENSMUSG00175015767
 protein coding gene Chr1:80521415-80522406 (+)
C57BL/6NJ ENSMUSG00215012400
 protein coding gene Chr1:80435123-80436114 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014333
 protein coding gene Chr1:76235572-76236556 (+)
CAST/EiJ ENSTCUG00005027169
 protein coding gene Chr1:80111055-80112045 (+)
CBA/J ENSMUSG00210039387
 protein coding gene Chr1:80296295-80297286 (+)
DBA/2J ENSMUSG00185028803
 protein coding gene Chr1:81343769-81344760 (+)
FVB/NJ ENSMUSG00205029704
 protein coding gene Chr1:79859754-79860706 (+)
JF1/MsJ ENSUMUG00000003575
 protein coding gene Chr1:80159737-80160704 (+)
LP/J ENSMUSG00230013349
 protein coding gene Chr1:81279925-81280916 (+)
NOD/ShiLtJ ENSMUSG00190023939
 protein coding gene Chr1:80499854-80500845 (+)
NZO/HlLtJ ENSMUSG00225002164
 protein coding gene Chr1:84525269-84526260 (+)
PWK/PhJ ENSLUMG00010012750
 protein coding gene Chr1:79783594-79784564 (+)
SPRET/EiJ ENSMSPG00010038806
 protein coding gene Chr1:81909057-81910009 (+)
WSB/EiJ ENSIUOG00005013580
 protein coding gene Chr1:80080616-80081568 (+)



Homology
more
  • Human Ortholog
    SCYGR1, small cysteine and glycine repeat containing 1
  • Vertebrate Orthologs
    8
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SCYGR1, small cysteine and glycine repeat containing 1
  • Synonyms
    KRTAP28-1
  • Links
    NCBI Gene ID: 112441428
    UniProt: A0A286YEY9

  • Chr Location
    2q36.3; chr2:227387683-227387949 (-)  GRCh38
  • Human Ortholog
    SCYGR2, small cysteine and glycine repeat containing 2
  • Synonyms
    KRTAP28-2
  • Links
    NCBI Gene ID: 112441435
    UniProt: A0A286YFB4

  • Chr Location
    2q36.3; chr2:227598893-227599255 (+)  GRCh38
  • Human Ortholog
    SCYGR3, small cysteine and glycine repeat containing 3
  • Synonyms
    KRTAP28-3
  • Links
    NCBI Gene ID: 112441429
    UniProt: A0A286YF60

  • Chr Location
    2q36.3; chr2:227614538-227614840 (-)  GRCh38
  • Human Ortholog
    SCYGR4, small cysteine and glycine repeat containing 4
  • Synonyms
    KRTAP28-4
  • Links
    NCBI Gene ID: 112441430
    UniProt: A0A286YEV6

  • Chr Location
    2q36.3; chr2:227617498-227617815 (+)  GRCh38
  • Human Ortholog
    SCYGR6, small cysteine and glycine repeat containing 6
  • Synonyms
    KRTAP28-6
  • Links
    NCBI Gene ID: 112441431
    UniProt: A0A286YF77

  • Chr Location
    2q36.3; chr2:227724440-227724757 (-)  GRCh38
  • Human Ortholog
    SCYGR7, small cysteine and glycine repeat containing 7
  • Synonyms
    KRTAP28-7
  • Links
    NCBI Gene ID: 112441438
    UniProt: A0A286YF01

  • Chr Location
    2q36.3; chr2:227728335-227728625 (+)  GRCh38
  • Human Ortholog
    SCYGR8, small cysteine and glycine repeat containing 8
  • Synonyms
    KRTAP28-8
  • Links
    NCBI Gene ID: 112441432
    UniProt: A0A286YFG1

  • Chr Location
    2q36.3; chr2:227745894-227746220 (+)  GRCh38
  • Human Ortholog
    SCYGR9, small cysteine and glycine repeat containing 9 (pseudogene)
  • Synonyms
    KRTAP28-9, KRTAP28p1
  • Links
    NCBI Gene ID: 117134595
    UniProt: P0DSO2

  • Chr Location
    2q36.3; chr2:227587237-227587515 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Krtap28-13
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71386 NCBI Gene Model | MGI Sequence Detail 992 C57BL/6J ±  kb
transcript NM_027778 RefSeq | MGI Sequence Detail 992 C57BL/6  
polypeptide NP_082054 RefSeq | MGI Sequence Detail 138 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 16
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:139791 Wu DD, et al., Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair. BMC Evol Biol. 2008;8:241
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory