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4933439K11Rik Gene Detail
Summary
  • Symbol
    4933439K11Rik
  • Name
    RIKEN cDNA 4933439K11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918569
    NCBI Gene: 71319
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:172369187-172378373 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 79.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    321 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918569
 lncRNA gene Chr1:172365700-172385696 (-)
129S1/SvImJ ENSMUSG00200047613
 lncRNA gene Chr1:170305189-170324980 (-)
A/J ENSMUSG00195048655
 lncRNA gene Chr1:169605293-169625066 (-)
AKR/J ENSMUSG00220031952
 lncRNA gene Chr1:169337863-169357660 (-)
BALB/cJ ENSMUSG00180046028
 lncRNA gene Chr1:169933850-169953646 (-)
C3H/HeJ ENSMUSG00175048622
 lncRNA gene Chr1:169944804-169964595 (-)
C57BL/6NJ ENSMUSG00215045167
 lncRNA gene Chr1:169323485-169343484 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013265
 unclassified non-coding RNA gene Chr1:162809417-162829153 (-)
CAST/EiJ ENSTCUG00005047142
 lncRNA gene Chr1:167895171-167915102 (-)
CBA/J ENSMUSG00210043450
 lncRNA gene Chr1:169809458-169829290 (-)
DBA/2J ENSMUSG00185031019
 lncRNA gene Chr1:174111586-174131427 (-)
FVB/NJ ENSMUSG00205039220
 lncRNA gene Chr1:168791600-168811428 (-)
JF1/MsJ ENSUMUG00000021250
 lncRNA gene Chr1:173039757-173059792 (-)
LP/J ENSMUSG00230032797
 lncRNA gene Chr1:173710011-173729802 (-)
NOD/ShiLtJ ENSMUSG00190043468
 lncRNA gene Chr1:169620269-169640044 (-)
NZO/HlLtJ ENSMUSG00225004973
 lncRNA gene Chr1:177290887-177310674 (-)
PWK/PhJ ENSLUMG00010036441
 lncRNA gene Chr1:168572267-168592049 (-)
SPRET/EiJ ENSMSPG00010049096
 lncRNA gene Chr1:171925540-171945293 (-)
WSB/EiJ ENSIUOG00005041641
 lncRNA gene Chr1:168957417-168977194 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 71319 NCBI Gene Model | MGI Sequence Detail 9187 C57BL/6J ±  kb
transcript NR_040558 RefSeq | MGI Sequence Detail 941 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory