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4933428G20Rik Gene Detail
Summary
  • Symbol
    4933428G20Rik
  • Name
    RIKEN cDNA 4933428G20 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918475
    NCBI Gene: 100141474
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:97381609-97391166 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 60.99 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    92 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918475
 lncRNA gene Chr11:97380375-97391189 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019032
 protein coding gene Chr11:99924442-99933983 (-)
A/J MGP_AJ_G0019000
 protein coding gene Chr11:95807876-95817429 (-)
AKR/J MGP_AKRJ_G0018970
 protein coding gene Chr11:98787689-98797226 (-)
BALB/cJ MGP_BALBcJ_G0018973
 protein coding gene Chr11:96296033-96305585 (-)
C3H/HeJ MGP_C3HHeJ_G0018787
 protein coding gene Chr11:98901781-98911422 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019425
 protein coding gene Chr11:103020568-103030068 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017056
 protein coding gene Chr11:93266984-93277441 (-)
CAST/EiJ MGP_CASTEiJ_G0018340
 protein coding gene Chr11:99762524-99773544 (-)
CBA/J MGP_CBAJ_G0018758
 protein coding gene Chr11:107262366-107271909 (-)
DBA/2J MGP_DBA2J_G0018866
 protein coding gene Chr11:95362693-95372249 (-)
FVB/NJ MGP_FVBNJ_G0018855
 protein coding gene Chr11:94849141-94860793 (-)
LP/J MGP_LPJ_G0018936
 protein coding gene Chr11:100433397-100442938 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018882
 protein coding gene Chr11:107125229-107134571 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019465
 protein coding gene Chr11:99083677-99093210 (-)
PWK/PhJ MGP_PWKPhJ_G0018112
 protein coding gene Chr11:96346054-96355612 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017902
 protein coding gene Chr11:98788907-98801174 (-)
WSB/EiJ MGP_WSBEiJ_G0018390
 protein coding gene Chr11:98987347-98997522 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    711
  • Tissues
    4
  • cDNA Data
    2
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047988 Ensembl Gene Model | MGI Sequence Detail 9558 C57BL/6J ±  kb
    transcript ENSMUST00000056955 Ensembl | MGI Sequence Detail 1425 Not Applicable  
    polypeptide Q9D3X4 UniProt | EBI | MGI Sequence Detail 101 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    Molecular
    Reagents
    less
    • All nucleic 3
      cDNA 3

      Microarray probesets 1
    References
    more
    • Summaries
      All 23
      Developmental Gene Expression 1
      Phenotypes 9
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory