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4933406I18Rik Gene Detail
Summary
  • Symbol
    4933406I18Rik
  • Name
    RIKEN cDNA 4933406I18 gene
  • Synonyms
    4933403D24Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918295
    NCBI Gene: 71045
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:113914714-114014396 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 59.33 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    741 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918295
 lncRNA gene Chr7:113914714-114014396 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007251
 lincRNA gene Chr7:117978801-118079330 (-)
A/J MGP_AJ_G0007248
 lincRNA gene Chr7:115027302-115125904 (-)
AKR/J MGP_AKRJ_G0007218
 lincRNA gene Chr7:117929012-118037258 (-)
BALB/cJ MGP_BALBcJ_G0007226
 lincRNA gene Chr7:114731915-114826290 (-)
C3H/HeJ MGP_C3HHeJ_G0007170
 lincRNA gene Chr7:117909123-118005231 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007396
 lincRNA gene Chr7:122725533-122827697 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006602
 lincRNA gene Chr7:116559120-116650755 (-)
CAST/EiJ MGP_CASTEiJ_G0007072
 lincRNA gene Chr7:109549040-109637460 (-)
CBA/J MGP_CBAJ_G0007153
 lincRNA gene Chr7:126828451-126921709 (-)
DBA/2J MGP_DBA2J_G0007174
 lincRNA gene Chr7:113085530-113175314 (-)
FVB/NJ MGP_FVBNJ_G0007196
 lincRNA gene Chr7:112941360-113036562 (-)
LP/J MGP_LPJ_G0007256
 lincRNA gene Chr7:119509300-119592959 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007173
 lincRNA gene Chr7:128388962-128491083 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007399
 lincRNA gene Chr7:116915551-117004246 (-)
PWK/PhJ MGP_PWKPhJ_G0007014
 lincRNA gene Chr7:105947132-106042151 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006923
 lincRNA gene Chr7:103645283-103741475 (-)
WSB/EiJ MGP_WSBEiJ_G0007133
 lincRNA gene Chr7:117778185-117877698 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 71045 NCBI Gene Model | MGI Sequence Detail 99683 C57BL/6J ±  kb
transcript NR_029438 RefSeq | MGI Sequence Detail 1045 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
less
MGI:1918266
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:61682 Hagiwara N, et al., Sox6 is a candidate gene for p100H myopathy, heart block, and sudden neonatal death. Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4180-5
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory