Kcnmb4os2 Gene Detail

Summary

• Symbol
  Kcnmb4os2
• Name
  potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 2
• Synonyms
  4933400F03Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1918263
  NCBI Gene: 100504412
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:116309068-116310892 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 64.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1918263	antisense lncRNA gene	Chr10:116309068-116311224 (+)
129S1/SvImJ	ENSMUSG00200027263	lncRNA gene	Chr10:112718373-112720529 (+)
A/J	ENSMUSG00195023465	lncRNA gene	Chr10:113153069-113155225 (+)
AKR/J	ENSMUSG00220015229	lncRNA gene	Chr10:112726767-112728923 (+)
BALB/cJ	ENSMUSG00180017662	lncRNA gene	Chr10:113170034-113172190 (+)
C3H/HeJ	ENSMUSG00175026009	lncRNA gene	Chr10:113114975-113117131 (+)
C57BL/6NJ	ENSMUSG00215022229	lncRNA gene	Chr10:112811349-112813505 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002550	antisense lncRNA gene	Chr10:109266603-109268784 (+)
CAST/EiJ	ENSTCUG00005032750	lncRNA gene	Chr10:112133331-112136020 (+)
CBA/J	ENSMUSG00210021696	lncRNA gene	Chr10:112964538-112966694 (+)
DBA/2J	ENSMUSG00185009770	lncRNA gene	Chr10:113089457-113091613 (+)
FVB/NJ	ENSMUSG00205026289	lncRNA gene	Chr10:112414010-112416166 (+)
JF1/MsJ	ENSUMUG00000021328	lncRNA gene	Chr10:114409612-114411762 (+)
LP/J	ENSMUSG00230026921	lncRNA gene	Chr10:115038431-115040587 (+)
NOD/ShiLtJ	ENSMUSG00190018794	lncRNA gene	Chr10:113214615-113216771 (+)
NZO/HlLtJ	ENSMUSG00225018696	lncRNA gene	Chr10:119293310-119295466 (+)
PWK/PhJ	ENSLUMG00010013314	lncRNA gene	Chr10:112797860-112800011 (+)
SPRET/EiJ	ENSMSPG00010017658	lncRNA gene	Chr10:114732169-114734306 (+)
WSB/EiJ	ENSIUOG00005014267	lncRNA gene	Chr10:112798039-112800195 (+)

Homology

• Gene Tree
  Kcnmb4os2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Kcnmb4os2
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000085837 (Evidence)
• NCBI Gene
  100504412

Representative Sequences			Length	Strain/Species
genomic	100504412	NCBI Gene Model | MGI Sequence Detail	1825	C57BL/6J
transcript	NR_130644	RefSeq | MGI Sequence Detail	1615	C57BL/6
polypeptide	Q9CUD7	UniProt | EBI | MGI Sequence Detail	321	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 3

References

• Summaries
  All 20

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

TSS for Kcnmb4os2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95872	Chr10:116309926-116309937 (+)	864 bp