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4921521D15Rik Gene Detail
Summary
  • Symbol
    4921521D15Rik
  • Name
    RIKEN cDNA 4921521D15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918117
    NCBI Gene: 70867
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:117762779-117767175 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918117
 lncRNA gene Chr3:117762779-117767175 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006287
 lincRNA gene Chr3:119970353-119975940 (+)
A/J MGP_AJ_G0006280
 lincRNA gene Chr3:116033758-116038206 (+)
AKR/J MGP_AKRJ_G0006256
 lincRNA gene Chr3:118956298-118960666 (+)
BALB/cJ MGP_BALBcJ_G0006254
 lincRNA gene Chr3:115862878-115867029 (+)
C3H/HeJ MGP_C3HHeJ_G0006206
 lincRNA gene Chr3:119353189-119357557 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006419
 lincRNA gene Chr3:124353416-124357782 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005715
 lincRNA gene Chr3:111635745-111637465 (+)
CAST/EiJ MGP_CASTEiJ_G0006139
 lincRNA gene Chr3:118663581-118667967 (+)
CBA/J MGP_CBAJ_G0006189
 lincRNA gene Chr3:128635258-128639423 (+)
DBA/2J MGP_DBA2J_G0006211
 lincRNA gene Chr3:115232400-115237501 (+)
FVB/NJ MGP_FVBNJ_G0006232
 lincRNA gene Chr3:112847403-112851765 (+)
LP/J MGP_LPJ_G0006292
 lincRNA gene Chr3:121532109-121536620 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006223
 lincRNA gene Chr3:136037513-136043401 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006425
 lincRNA gene Chr3:118504659-118509026 (+)
PWK/PhJ MGP_PWKPhJ_G0006077
 lincRNA gene Chr3:114890120-114894889 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005990
 lincRNA gene Chr3:116548535-116552861 (+)
WSB/EiJ MGP_WSBEiJ_G0006187
 lincRNA gene Chr3:119218581-119226784 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104703 Ensembl Gene Model | MGI Sequence Detail 4397 C57BL/6J ±  kb
transcript ENSMUST00000197578 Ensembl | MGI Sequence Detail 1927 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 9
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory