Evx1os Gene Detail

Summary

• Symbol
  Evx1os
• Name
  even skipped homeotic gene 1, opposite strand
• Synonyms
  5730457N03Rik, Evx1as

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1917843
  NCBI Gene: 70593
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:52285374-52291817 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 25.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  209 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917843	antisense lncRNA gene	Chr6:52285374-52291878 (-)
129S1/SvImJ	ENSMUSG00200005402	lncRNA gene	Chr6:49262551-49268991 (-)
A/J	ENSMUSG00195006882	lncRNA gene	Chr6:48986739-48993182 (-)
AKR/J	ENSMUSG00220004852	lncRNA gene	Chr6:48695566-48702008 (-)
BALB/cJ	ENSMUSG00180027246	lncRNA gene	Chr6:49288481-49294925 (-)
C3H/HeJ	ENSMUSG00175018347	lncRNA gene	Chr6:49054793-49061235 (-)
C57BL/6NJ	ENSMUSG00215010972	lncRNA gene	Chr6:49239142-49245588 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003860	antisense lncRNA gene	Chr6:46791619-46798088 (-)
CAST/EiJ	ENSTCUG00005004998	lncRNA gene	Chr6:48544625-48551060 (-)
CBA/J	ENSMUSG00210018762	lncRNA gene	Chr6:49099094-49105534 (-)
DBA/2J	ENSMUSG00185014080	lncRNA gene	Chr6:49681317-49687758 (-)
FVB/NJ	ENSMUSG00205029028	lncRNA gene	Chr6:49339678-49346122 (-)
JF1/MsJ	ENSUMUG00000013116	lncRNA gene	Chr6:49053099-49059514 (-)
LP/J	ENSMUSG00230019775	lncRNA gene	Chr6:50759822-50766263 (-)
NOD/ShiLtJ	ENSMUSG00190037696	lncRNA gene	Chr6:49016854-49023294 (-)
NZO/HlLtJ	ENSMUSG00225013832	lncRNA gene	Chr6:52743813-52750254 (-)
PWK/PhJ	ENSLUMG00010021464	lncRNA gene	Chr6:48790331-48796727 (-)
SPRET/EiJ	ENSMSPG00010009906	lncRNA gene	Chr6:49375674-49382094 (-)
WSB/EiJ	ENSIUOG00005027887	lncRNA gene	Chr6:49361954-49368395 (-)

Homology

• Gene Tree
  Evx1os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype from 1 allele in 1 genetic background
  3 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Mice homozygous for a null allele are viable with no obvious defects.

Expression

• Assay Results
  597
• cDNA Data
  2
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  1

• Ensembl
  ENSMUSG00000086126 (Evidence)
• NCBI Gene
  70593

Representative Sequences			Length	Strain/Species
genomic	70593	NCBI Gene Model | MGI Sequence Detail	6444	C57BL/6J
transcript	NR_038163	RefSeq | MGI Sequence Detail	2916	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Developmental Gene Expression 1

  Phenotypes 3
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:330639 Han X, et al., Mouse knockout models reveal largely dispensable but context-dependent functions of lncRNAs during development. J Mol Cell Biol. 2018 Apr 1;10(2):175-178

TSS for Evx1os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61034	Chr6:52290483-52290495 (-)	1,328 bp