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5730420D15Rik Gene Detail
Summary
  • Symbol
    5730420D15Rik
  • Name
    RIKEN cDNA 5730420D15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917773
    NCBI Gene: 70523
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:95253237-95264502 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 49.37 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    66 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917773
 lncRNA gene Chr10:95253228-95279547 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005149
 lincRNA gene Chr10:96974465-96985719 (+)
A/J MGP_AJ_G0005132
 lincRNA gene Chr10:93559583-93570847 (+)
AKR/J MGP_AKRJ_G0005110
 lincRNA gene Chr10:96236237-96247503 (+)
BALB/cJ MGP_BALBcJ_G0005112
 lincRNA gene Chr10:93824930-93836199 (+)
C3H/HeJ MGP_C3HHeJ_G0005061
 lincRNA gene Chr10:96231651-96242876 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005263
 lincRNA gene Chr10:100185342-100196598 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004668
 lincRNA gene Chr10:89119461-89130311 (+)
CAST/EiJ MGP_CASTEiJ_G0005009
 lincRNA gene Chr10:96244948-96256161 (+)
CBA/J MGP_CBAJ_G0005052
 lincRNA gene Chr10:104313540-104324803 (+)
DBA/2J MGP_DBA2J_G0005069
 lincRNA gene Chr10:92651509-92662849 (+)
FVB/NJ MGP_FVBNJ_G0005093
 lincRNA gene Chr10:91898719-91909966 (+)
LP/J MGP_LPJ_G0005150
 lincRNA gene Chr10:97598471-97609672 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005076
 lincRNA gene Chr10:105495134-105506397 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005268
 lincRNA gene Chr10:96139536-96150790 (+)
PWK/PhJ MGP_PWKPhJ_G0004959
 lincRNA gene Chr10:92757988-92768330 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004885
 lincRNA gene Chr10:94972846-94983993 (+)
WSB/EiJ MGP_WSBEiJ_G0005056
 lincRNA gene Chr10:96116732-96127992 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    3
  • Transposon induced
    1
  • Genomic Mutations
    2 involving 5730420D15Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 70523 NCBI Gene Model | MGI Sequence Detail 11266 C57BL/6J ±  kb
transcript NR_045338 RefSeq | MGI Sequence Detail 1182 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory