2610024D14Rik Pseudogene Detail

Summary

• Symbol
  2610024D14Rik
• Name
  RIKEN cDNA 2610024D14 gene

• Feature Type
  pseudogene
• IDs
  MGI:1917660
  NCBI Gene: 108167888
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:21049534-21049827 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 13.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917660	pseudogene	Chr11:21048869-21050616 (+)
129S1/SvImJ	ENSMUSG00200022639	pseudogene	Chr11:18063113-18063406 (+)
A/J	ENSMUSG00195005531	pseudogene	Chr11:17912830-17913123 (+)
AKR/J	ENSMUSG00220003533	pseudogene	Chr11:17998327-17998620 (+)
BALB/cJ	ENSMUSG00180004000	pseudogene	Chr11:17901925-17902218 (+)
C3H/HeJ	ENSMUSG00175008131	pseudogene	Chr11:17928949-17929242 (+)
C57BL/6NJ	ENSMUSG00215003386	pseudogene	Chr11:17992119-17992412 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009513	pseudogene	Chr11:16998567-16998860 (+)
CAST/EiJ	ENSTCUG00005007855	pseudogene	Chr11:17876048-17876341 (+)
CBA/J	ENSMUSG00210009412	pseudogene	Chr11:17916878-17917171 (+)
DBA/2J	ENSMUSG00185011926	pseudogene	Chr11:18020383-18020676 (+)
FVB/NJ	ENSMUSG00205005349	pseudogene	Chr11:17987011-17987304 (+)
JF1/MsJ	ENSUMUG00000006000	pseudogene	Chr11:18197530-18197823 (+)
LP/J	ENSMUSG00230004304	pseudogene	Chr11:19052093-19052386 (+)
NOD/ShiLtJ	ENSMUSG00190008784	pseudogene	Chr11:18058352-18058645 (+)
NZO/HlLtJ	ENSMUSG00225022118	pseudogene	Chr11:21097444-21097737 (+)
PWK/PhJ	ENSLUMG00010012053	pseudogene	Chr11:17857774-17858067 (+)
SPRET/EiJ	ENSMSPG00010018218	pseudogene	Chr11:18135634-18135927 (+)
WSB/EiJ	ENSIUOG00005010299	pseudogene	Chr11:17963964-17964257 (+)

Homology

• Gene Tree
  2610024D14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 2610024D14Rik
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000084362 (Evidence)
• NCBI Gene
  108167888

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084362	Ensembl Gene Model | MGI Sequence Detail	294	C57BL/6J
transcript	ENSMUST00000121233	Ensembl | MGI Sequence Detail	294	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 11

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573