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Plut Gene Detail
Summary
  • Symbol
    Plut
  • Name
    PDX1 associated lncRNA, upregulator of transcription
  • Synonyms
    2210019I11Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917397
    NCBI Gene: 70147
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:147165408-147208331 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 86.82 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917397
 lncRNA gene Chr5:147165406-147208331 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004219
 antisense lncRNA gene Chr5:152868221-152914825 (-)
A/J MGP_AJ_G0004197
 antisense lncRNA gene Chr5:146396487-146439799 (-)
AKR/J MGP_AKRJ_G0004178
 antisense lncRNA gene Chr5:150896857-150941793 (-)
BALB/cJ MGP_BALBcJ_G0004184
 antisense lncRNA gene Chr5:147609534-147652458 (-)
C3H/HeJ MGP_C3HHeJ_G0004132
 antisense lncRNA gene Chr5:151860384-151905824 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004333
 antisense lncRNA gene Chr5:158469039-158516764 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003806
 antisense lncRNA gene Chr5:140812710-140856354 (-)
CAST/EiJ MGP_CASTEiJ_G0004094
 antisense lncRNA gene Chr5:151416284-151461621 (-)
CBA/J MGP_CBAJ_G0004126
 antisense lncRNA gene Chr5:165072299-165122998 (-)
DBA/2J MGP_DBA2J_G0004142
 antisense lncRNA gene Chr5:146080647-146123789 (-)
FVB/NJ MGP_FVBNJ_G0004158
 antisense lncRNA gene Chr5:145276484-145319965 (-)
LP/J MGP_LPJ_G0004220
 antisense lncRNA gene Chr5:153571925-153616918 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004148
 antisense lncRNA gene Chr5:167360680-167405278 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004330
 antisense lncRNA gene Chr5:150795617-150841262 (-)
PWK/PhJ MGP_PWKPhJ_G0004047
 antisense lncRNA gene Chr5:145160293-145206158 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003991
 antisense lncRNA gene Chr5:148126306-148169474 (-)
WSB/EiJ MGP_WSBEiJ_G0004130
 antisense lncRNA gene Chr5:151598732-151649397 (-)



Homology
more
  • Human Ortholog
    PLUT, PDX1 associated lncRNA, upregulator of transcription
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PLUT, PDX1 associated lncRNA, upregulator of transcription
  • Synonyms
    HI-LNC71, PDX1-AS1, PLUTO
  • Links
    NCBI Gene ID: 100861550

  • Chr Location
    13q12.2; chr13:27819092-27917298 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 70147 NCBI Gene Model | MGI Sequence Detail 42924 C57BL/6J ±  kb
transcript NR_038157 RefSeq | MGI Sequence Detail 1442 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:238473 Akerman I, et al., Human Pancreatic beta Cell lncRNAs Control Cell-Specific Regulatory Networks. Cell Metab. 2017 Feb 7;25(2):400-411
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory