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Trnp1 Gene Detail
Summary
  • Symbol
    Trnp1
  • Name
    TMF1-regulated nuclear protein 1
  • Synonyms
    2300002D11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916789
    NCBI Gene: 69539
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:133218411-133225861 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 66.25 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    319 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916789
 protein coding gene Chr4:133218408-133226446 (-)
129S1/SvImJ ENSMUSG00200020080
 protein coding gene Chr4:126656794-126664362 (-)
A/J ENSMUSG00195040357
 protein coding gene Chr4:127992051-127999504 (-)
AKR/J ENSMUSG00220046501
 protein coding gene Chr4:126983829-126991291 (-)
BALB/cJ ENSMUSG00180047200
 protein coding gene Chr4:125625834-125633384 (-)
C3H/HeJ ENSMUSG00175041218
 protein coding gene Chr4:126638087-126645550 (-)
C57BL/6NJ ENSMUSG00215051222
 protein coding gene Chr4:128149181-128156632 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026590
 protein coding gene Chr4:123140156-123147454 (-)
CAST/EiJ ENSTCUG00005042367
 protein coding gene Chr4:127542359-127549890 (-)
CBA/J ENSMUSG00210053127
 protein coding gene Chr4:126267066-126274525 (-)
DBA/2J ENSMUSG00185051980
 protein coding gene Chr4:127799359-127806905 (-)
FVB/NJ ENSMUSG00205047134
 protein coding gene Chr4:126044883-126052355 (-)
JF1/MsJ ENSUMUG00000019688
 protein coding gene Chr4:128470447-128477916 (-)
LP/J ENSMUSG00230035187
 protein coding gene Chr4:131595051-131603033 (-)
NOD/ShiLtJ ENSMUSG00190031266
 protein coding gene Chr4:126031722-126039269 (-)
NZO/HlLtJ ENSMUSG00225024974
 protein coding gene Chr4:137515224-137522672 (-)
PWK/PhJ ENSLUMG00010040722
 protein coding gene Chr4:125483274-125490798 (-)
SPRET/EiJ ENSMSPG00010039872
 protein coding gene Chr4:127559875-127560797 (-)
WSB/EiJ ENSIUOG00005034621
 protein coding gene Chr4:125923682-125931127 (-)



Homology
more
  • Human Ortholog
    TRNP1, TMF1 regulated nuclear protein 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRNP1, TMF1 regulated nuclear protein 1
  • Synonyms
    C1orf225, TNRP, TRNP
  • Links
    NCBI Gene ID: 388610
    UniProt: Q6NT89

  • Chr Location
    1p36.11; chr1:26993692-27001912 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    2
  • Gene trapped
    3
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Trnp1
  • Find Mice (IMSR)
    7 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    802
  • Tissues
    47
  • cDNA Data
    14
  • Literature Summary
    7
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056596 Ensembl Gene Model | MGI Sequence Detail 7451 C57BL/6J ±  kb
transcript ENSMUST00000125541 Ensembl | MGI Sequence Detail 1654 Not Applicable  
polypeptide ENSMUSP00000129613 Ensembl | MGI Sequence Detail 223 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16
    Antibodies 1

    Microarray probesets 3
References
more
  • Summaries
    All 42
    Developmental Gene Expression 7
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory