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2300009A05Rik Gene Detail
Summary
  • Symbol
    2300009A05Rik
  • Name
    RIKEN cDNA 2300009A05 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916728
    NCBI Gene: 69478
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:63301729-63306526 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 34.06 cM, cytoband D
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916728
 protein coding gene Chr9:63301729-63306528 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034929
 protein coding gene Chr9:62988405-62993204 (-)
A/J MGP_AJ_G0034909
 protein coding gene Chr9:60901713-60906512 (-)
AKR/J MGP_AKRJ_G0034839
 protein coding gene Chr9:62317693-62322492 (-)
BALB/cJ MGP_BALBcJ_G0034902
 protein coding gene Chr9:60628644-60633443 (-)
C3H/HeJ MGP_C3HHeJ_G0034612
 protein coding gene Chr9:62832957-62837756 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035421
 protein coding gene Chr9:64719983-64724782 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032332
 protein coding gene Chr9:60561561-60566305 (-)
CAST/EiJ MGP_CASTEiJ_G0033933
 protein coding gene Chr9:62981795-62986594 (-)
CBA/J MGP_CBAJ_G0034583
 protein coding gene Chr9:66947253-66952052 (-)
DBA/2J MGP_DBA2J_G0034742
 protein coding gene Chr9:60689942-60694750 (-)
FVB/NJ MGP_FVBNJ_G0034684
 protein coding gene Chr9:59987126-59991925 (-)
LP/J MGP_LPJ_G0034825
 protein coding gene Chr9:63272380-63277179 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034727
 protein coding gene Chr9:68265615-68270938 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035443
 protein coding gene Chr9:62404655-62409454 (-)
PWK/PhJ MGP_PWKPhJ_G0033637
 protein coding gene Chr9:60828935-60833863 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033471
 protein coding gene Chr9:62679799-62684587 (-)
WSB/EiJ MGP_WSBEiJ_G0034046
 protein coding gene Chr9:62309336-62314135 (-)



Homology
more
  • Human Ortholog
    C15orf61, chromosome 15 open reading frame 61
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C15orf61, chromosome 15 open reading frame 61
  • Links
    NCBI Gene ID: 145853
    neXtProt AC: NX_A6NNL5
    UniProt: A6NNL5

  • Chr Location
    15q23; chr15:67521131-67530146 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving 2300009A05Rik
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
DNA-templated transcription
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69478 NCBI Gene Model | MGI Sequence Detail 4798 C57BL/6J ±  kb
transcript NM_027090 RefSeq | MGI Sequence Detail 612 C57BL/6  
polypeptide Q0VG49 UniProt | EBI | MGI Sequence Detail 157 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 6
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/21/2023
MGI 6.22 		The Jackson Laboratory