1700026F02Rik Gene Detail

Summary

• Symbol
  1700026F02Rik
• Name
  RIKEN cDNA 1700026F02 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1916669
  NCBI Gene: 69419
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:71459372-71479399 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  455 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916669	lncRNA gene	Chr8:71400890-71538406 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195017971	lncRNA gene	Chr8:66531751-66604786 (-)
AKR/J	ENSMUSG00220025597	lncRNA gene	Chr8:66452042-66583391 (-)
BALB/cJ	ENSMUSG00180029163	lncRNA gene	Chr8:66182697-66302999 (-)
C3H/HeJ	ENSMUSG00175022161	lncRNA gene	Chr8:66462675-66582906 (-)
C57BL/6NJ	ENSMUSG00215038757	lncRNA gene	Chr8:66134209-66207260 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040517	lncRNA gene	Chr8:65937880-66078449 (-)
CBA/J	ENSMUSG00210035687	lncRNA gene	Chr8:66228195-66348397 (-)
DBA/2J	ENSMUSG00185013641	lncRNA gene	Chr8:72387834-72508050 (-)
FVB/NJ	ENSMUSG00205045105	lncRNA gene	Chr8:65732445-65823578 (-)
JF1/MsJ	ENSUMUG00000043781	lncRNA gene	Chr8:74660156-74790315 (-)
LP/J	ENSMUSG00230035194	lncRNA gene	Chr8:75999321-76119520 (-)
NOD/ShiLtJ	ENSMUSG00190031587	lncRNA gene	Chr8:66141309-66278838 (-)
NZO/HlLtJ	ENSMUSG00225048493	lncRNA gene	Chr8:79408473-79519679 (-)
PWK/PhJ	ENSLUMG00010035288	lncRNA gene	Chr8:66116971-66251192 (-)
SPRET/EiJ	ENSMSPG00010041836	lncRNA gene	Chr8:67802654-67958418 (-)
WSB/EiJ	ENSIUOG00005027427	lncRNA gene	Chr8:67019115-67148388 (-)

Homology

• Gene Tree
  1700026F02Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 1700026F02Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  1

• Ensembl
  ENSMUSG00000101854 (Evidence)
• NCBI Gene
  69419

Representative Sequences			Length	Strain/Species
genomic	69419	NCBI Gene Model | MGI Sequence Detail	20028	C57BL/6J
transcript	NR_045487	RefSeq | MGI Sequence Detail	482	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573