1700007P06Rik MGI Mouse Gene Detail - MGI:1916558

Sequence Map

Chr1:186857335-186860049 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916558	lncRNA gene	Chr1:186857288-186864919 (+)
129S1/SvImJ	ENSMUSG00200004825	lncRNA gene	Chr1:184637779-184640493 (+)
A/J	ENSMUSG00195008737	lncRNA gene	Chr1:184203577-184206291 (+)
AKR/J	ENSMUSG00220020968	lncRNA gene	Chr1:183457744-183460458 (+)
BALB/cJ	ENSMUSG00180020707	lncRNA gene	Chr1:184278588-184281302 (+)
C3H/HeJ	ENSMUSG00175023432	lncRNA gene	Chr1:184454001-184456715 (+)
C57BL/6NJ	ENSMUSG00215023247	lncRNA gene	Chr1:183674645-183677359 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002468	antisense lncRNA gene	Chr1:176971938-176974650 (+)
CAST/EiJ	ENSTCUG00005043912	lncRNA gene	Chr1:182249784-182252501 (+)
CBA/J	ENSMUSG00210003695	lncRNA gene	Chr1:184139217-184141931 (+)
DBA/2J	ENSMUSG00185037732	lncRNA gene	Chr1:188752476-188755190 (+)
FVB/NJ	ENSMUSG00205004568	lncRNA gene	Chr1:183128257-183130971 (+)
JF1/MsJ	ENSUMUG00000007171	lncRNA gene	Chr1:187717969-187720685 (+)
LP/J	ENSMUSG00230024769	lncRNA gene	Chr1:188299804-188302518 (+)
NOD/ShiLtJ	ENSMUSG00190035013	lncRNA gene	Chr1:184110710-184113424 (+)
NZO/HlLtJ	ENSMUSG00225011623	lncRNA gene	Chr1:192033085-192035799 (+)
PWK/PhJ	ENSLUMG00010017207	lncRNA gene	Chr1:182965863-182968577 (+)
SPRET/EiJ	ENSMSPG00010027515	lncRNA gene	Chr1:186497060-186499769 (+)
WSB/EiJ	ENSIUOG00005005521	lncRNA gene	Chr1:183435550-183438264 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	69308	NCBI Gene Model \| MGI Sequence Detail	2715	C57BL/6J	± kb
	transcript	NR_040554	RefSeq \| MGI Sequence Detail	823	C57BL/6

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Summaries

All 9
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 1700007P06Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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