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Ctdspl Gene Detail
Summary
  • Symbol
    Ctdspl
  • Name
    CTD small phosphatase like
  • Synonyms
    2810418J22Rik, HYA22, SCP3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916524
    NCBI Gene: 69274
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:118755521-118873066 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 9, 71.07 cM, cytoband F4
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    695 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916524
protein coding gene Chr9:118751313-118873187 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035408
protein coding gene Chr9:121641135-121757952 (+)
A/J MGP_AJ_G0035388
protein coding gene Chr9:117143551-117261015 (+)
AKR/J MGP_AKRJ_G0035321
protein coding gene Chr9:120178101-120295368 (+)
BALB/cJ MGP_BALBcJ_G0035384
protein coding gene Chr9:117005221-117126188 (+)
C3H/HeJ MGP_C3HHeJ_G0035092
protein coding gene Chr9:120642856-120765700 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035907
protein coding gene Chr9:124957817-125101365 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032790
protein coding gene Chr9:114332894-114453100 (+)
CAST/EiJ MGP_CASTEiJ_G0034396
protein coding gene Chr9:120598988-120722374 (+)
CBA/J MGP_CBAJ_G0035059
protein coding gene Chr9:129665453-129801483 (+)
DBA/2J MGP_DBA2J_G0035218
protein coding gene Chr9:116577822-116696681 (+)
FVB/NJ MGP_FVBNJ_G0035165
protein coding gene Chr9:115419363-115538127 (+)
LP/J MGP_LPJ_G0035297
protein coding gene Chr9:121974850-122104661 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035206
protein coding gene Chr9:130669378-130794789 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035926
protein coding gene Chr9:120557378-120683189 (+)
PWK/PhJ MGP_PWKPhJ_G0034103
protein coding gene Chr9:116982123-117108122 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033937
protein coding gene Chr9:120652793-120777009 (+)
WSB/EiJ MGP_WSBEiJ_G0034517
protein coding gene Chr9:120446743-120569303 (+)



Homology
more
  • Human Ortholog
    CTDSPL, CTD small phosphatase like
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CTDSPL, CTD small phosphatase like
  • Synonyms
    C3orf8, HYA22, PSR1, RBSP3, SCP3
  • Links
    NCBI Gene ID: 10217
    neXtProt AC: NX_O15194
    UniProt: O15194

  • Chr Location
    3p22.2; chr3:37861880-37984469 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    19 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047409 Ensembl Gene Model | MGI Sequence Detail 117546 C57BL/6J ±  kb
    transcript ENSMUST00000073109 Ensembl | MGI Sequence Detail 4589 Not Applicable  
    polypeptide ENSMUSP00000072852 Ensembl | MGI Sequence Detail 276 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 88
      cDNA 88

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2143037
    References
    more
    • Summaries
      All 50
      Developmental Gene Expression 1
      Gene Ontology 6
      Phenotypes 19
    • Earliest
      J:12215 Chubb C, Oligotriche and quaking gene mutations. Phenotypic effects on mouse spermatogenesis and testicular steroidogenesis. J Androl. 1992 Jul-Aug;13(4):312-7
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    last database update
    06/12/2024
    MGI 6.13
    The Jackson Laboratory