1500012K07Rik Gene Detail

Summary

• Symbol
  1500012K07Rik
• Name
  RIKEN cDNA 1500012K07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1916204
  NCBI Gene: 68954
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:74958444-74981167 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 43.71 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  905 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916204	lncRNA gene	Chr7:74958243-74981167 (+)
129S1/SvImJ	ENSMUSG00200035098	lncRNA gene	Chr7:61730443-61753180 (+)
A/J	ENSMUSG00195015761	lncRNA gene	Chr7:66157727-66180479 (+)
AKR/J	ENSMUSG00220020933	lncRNA gene	Chr7:59703517-59726263 (+)
BALB/cJ	ENSMUSG00180013664	lncRNA gene	Chr7:62863238-62885989 (+)
C3H/HeJ	ENSMUSG00175022393	lncRNA gene	Chr7:63631872-63654604 (+)
C57BL/6NJ	ENSMUSG00215035914	lncRNA gene	Chr7:62772618-62795340 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013801	unclassified non-coding RNA gene	Chr7:78047996-78070096 (+)
CAST/EiJ	ENSTCUG00005004608	lncRNA gene	Chr7:66266191-66289590 (+)
CBA/J	ENSMUSG00210024158	lncRNA gene	Chr7:63490256-63512989 (+)
DBA/2J	ENSMUSG00185001440	lncRNA gene	Chr7:67813105-67835840 (+)
FVB/NJ	ENSMUSG00205031425	lncRNA gene	Chr7:63450395-63473134 (+)
JF1/MsJ	ENSUMUG00000032241	lncRNA gene	Chr7:72546452-72575412 (+)
LP/J	ENSMUSG00230015458	lncRNA gene	Chr7:73896732-73919479 (+)
NOD/ShiLtJ	ENSMUSG00190020444	lncRNA gene	Chr7:63629165-63651917 (+)
NZO/HlLtJ	ENSMUSG00225042904	lncRNA gene	Chr7:72158248-72180989 (+)
PWK/PhJ	ENSLUMG00010017991	lncRNA gene	Chr7:62101072-62130058 (+)
SPRET/EiJ	ENSMSPG00010026893	lncRNA gene	Chr7:62533039-62555042 (+)
WSB/EiJ	ENSIUOG00005023433	lncRNA gene	Chr7:64020999-64043972 (+)

Homology

• Gene Tree
  1500012K07Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving 1500012K07Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  2

• Ensembl
  ENSMUSG00000097247 (Evidence)
• NCBI Gene
  68954

Representative Sequences			Length	Strain/Species
genomic	68954	NCBI Gene Model | MGI Sequence Detail	22724	C57BL/6J
transcript	NR_045814	RefSeq | MGI Sequence Detail	2341	C57BL/6

Molecular
Reagents

• All nucleic 4

  Genomic 2

  cDNA 2

References

• Summaries
  All 20

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582