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Ccdc163 Gene Detail
Summary
  • Symbol
    Ccdc163
  • Name
    coiled-coil domain containing 163
  • Synonyms
    0610037D15Rik, 4933430J04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915644
    NCBI Gene: 68394
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:116565537-116572881 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 53.29 cM, cytoband C7
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    59 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915644
protein coding gene Chr4:116565537-116608403 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028633
protein coding gene Chr4:117625060-117672981 (+)
A/J MGP_AJ_G0028594
protein coding gene Chr4:113109161-113151831 (+)
AKR/J MGP_AKRJ_G0028544
protein coding gene Chr4:115557371-115606949 (+)
BALB/cJ MGP_BALBcJ_G0028615
protein coding gene Chr4:113738789-113783563 (+)
C3H/HeJ MGP_C3HHeJ_G0028329
protein coding gene Chr4:117127047-117170531 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029056
protein coding gene Chr4:122176478-122220024 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026340
protein coding gene Chr4:107149263-107198827 (+)
CAST/EiJ MGP_CASTEiJ_G0027763
protein coding gene Chr4:114353436-114402736 (+)
CBA/J MGP_CBAJ_G0028296
protein coding gene Chr4:125488344-125534111 (+)
DBA/2J MGP_DBA2J_G0028444
protein coding gene Chr4:113745692-113788320 (+)
FVB/NJ MGP_FVBNJ_G0028412
protein coding gene Chr4:112244036-112287025 (+)
LP/J MGP_LPJ_G0028546
protein coding gene Chr4:117826651-117870573 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028439
protein coding gene Chr4:130477868-130527432 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029093
protein coding gene Chr4:116710324-116755853 (+)
PWK/PhJ MGP_PWKPhJ_G0027489
protein coding gene Chr4:110520891-110566415 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027312
protein coding gene Chr4:112983550-113031862 (+)
WSB/EiJ MGP_WSBEiJ_G0027842
protein coding gene Chr4:116585417-116630646 (+)



Homology
more
  • Human Ortholog
    CCDC163, CCDC163 homolog
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC163, CCDC163 homolog
  • Synonyms
    C1orf231, CCDC163P
  • Links
    NCBI Gene ID: 126661
    UniProt: A0A0D9SF12

  • Chr Location
    1p34.1; chr1:45493926-45500079 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 68394 NCBI Gene Model | MGI Sequence Detail 7345 C57BL/6J ±  kb
transcript NM_001356315 RefSeq | MGI Sequence Detail 2182 C57BL/6  
polypeptide NP_001343244 RefSeq | MGI Sequence Detail 339 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR039284 Coiled-coil domain-containing protein 159/163
Molecular
Reagents
less
  • All nucleic 22
    cDNA 22

    Microarray probesets 4
Other
Accession IDs
less
MGI:1918510
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Phenotypes 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/24/2023
MGI 6.22
The Jackson Laboratory